| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1922 |
|---|
| Symbol | |
|---|
| ID | 6123586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2130558 |
|---|
| End bp | 2131037 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641638491 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001765205 |
|---|
| Protein GI | 170733258 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.411154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CGGCAACCCC GACGGAAGGC CCGTCGATCG AAAGCCCGTT CGTCGATCTG
CTCGGCGTGC AGCTCGTGTC CGCGAAGGAT GGTGCGAGCG AAATCGTGCT GCCGCTCGAG
GAGCGCCACA TGAACACGTG GAGCATCGCG CACGGCGGCG TGACGATGAC GCTCGCCGAT
ATCGCGCTTG CGATGGCGGC GCGCAGCCTG ACCGACGACG GCGTCGGCGT CGTCACGGTC
GAGATGAAGG TGAACTTCAT GCAGCCGGGC CGCGGCGAGC TGCGCGCCTA CGGGCGCGTG
ATGCACCGCT CGACGACGAT GGCCTACTGC GAAGGCGAAG TGCGCGACAG CGACGGCAAT
TTCGTCGCGA AGGCGCTCGG TACGTTCAAG TACATGCGGC GGCTCGCGGT CGGCCGCGAC
ATCAAGCGGC AACGCTCGCG CACGGCGCCG GACGCGCAAC CCGGCCCGAG CGACGCGTAA
|
|---|
| Protein sequence | MSDAATPTEG PSIESPFVDL LGVQLVSAKD GASEIVLPLE ERHMNTWSIA HGGVTMTLAD
IALAMAARSL TDDGVGVVTV EMKVNFMQPG RGELRAYGRV MHRSTTMAYC EGEVRDSDGN
FVAKALGTFK YMRRLAVGRD IKRQRSRTAP DAQPGPSDA
|
|---|
| |