Gene Reut_A3016 details

Gene Information

• Locus tag: Reut_A3016
• ID: 3611769
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007347
• Strand: +
• Start bp: 3319276
• End bp: 3319812
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637692432
• Product: phenylacetic acid degradation-related protein:phenylacetic acid degradation protein PaaD
• Protein accession: YP_297220
• Protein GI: 73542700
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1; [TIGR02286] phenylacetic acid degradation protein PaaD

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTTCCT GGAAAAGCGC GCGCCGAAGT TCACCGGCCG CTGACCTGCA GGCGCCATCG 
TGCGCCGCCC CACCGAGACA GGAGACCCGC TTGACCAAGA ACCCGCAGGC ACTTGCCGAG 
TCGGCCGCCG CCGCCATGTA TGAAGCCGAT ACCTGTAGCC GCTGGCTCGG CATCGTGGTG 
CAGGAAGTAC GGCCCGGCTA TGCCCGGCTG ACCATGCCGG TACGCCCCGA ATTCCTCAAT 
GGCCACGGCA TCTGCCACGG CGGCCTGATG TTTACACTGG CTGACTCCAG CTTCGCTTTC 
GCGTGCAATA GCCACAATAT CAATACCGTG GCGGCAGGCT GCAGCATCGA GTTCCTCAAA 
CCCGTGCATG GCGGCGACGT GCTGACCGCC GAAGCGGTGG AACAGATCTT GTCGGGGCGG 
CACGGCATCT ACGATATCCG CGTGACCAAT CTTGCCGGCG AGGCCGTGGC GATGTTCCGC 
GGCAAGTCGG CGCAGATCAA GGGACACGTG GTACCGCCGG ACAGCAGCAG CACCTGA 

 

Protein sequence

MPSWKSARRS SPAADLQAPS CAAPPRQETR LTKNPQALAE SAAAAMYEAD TCSRWLGIVV 
QEVRPGYARL TMPVRPEFLN GHGICHGGLM FTLADSSFAF ACNSHNINTV AAGCSIEFLK 
PVHGGDVLTA EAVEQILSGR HGIYDIRVTN LAGEAVAMFR GKSAQIKGHV VPPDSSST