| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0512 |
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| Symbol | |
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| ID | 6122193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 555954 |
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| End bp | 556406 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641637069 |
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| Product | phenylacetic acid degradation protein PaaD |
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| Protein accession | YP_001763812 |
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| Protein GI | 170731865 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.245476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.787837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAATG CCACCGCCAC GCTCGACCCC GACTCGCTCG CCCGCGCCAC CGCGCAAGCC
ATGTACGACG CCGACGCCTG CAGCCGCGCG TTCGGCATGG AAATCGCCGA AGTACGCGCA
GGCTACGCCC GCCTTCAGAT GCGGGTGCGG CCCGAATTCC TGAACGGGCA CCAGACCTGC
CACGGCGGCA TCATCTTCAC GCTCGCCGAT TCGACGTTCG CGTTCGCGTG CAACTCGTAC
AACCTGAATG CGGTCGCGGC CGGCTGCTCG ATCGAATTCC TCCGCCCCGT GCACGGCGGC
GACGTGCTGA CAGCCGAGGC GATCGAGCAG GCGCGTGCCG GCCGCCACGG CATCTACGAC
ATCCGCGTCA CGAACCAGAC AGGCGACACG GTTGCGATGT TTCGCGGCAA ATCCGCCCAG
ATCAAGGGCA CGGTCATCCC GGAAGACCGC TGA
|
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| Protein sequence | MTNATATLDP DSLARATAQA MYDADACSRA FGMEIAEVRA GYARLQMRVR PEFLNGHQTC
HGGIIFTLAD STFAFACNSY NLNAVAAGCS IEFLRPVHGG DVLTAEAIEQ ARAGRHGIYD
IRVTNQTGDT VAMFRGKSAQ IKGTVIPEDR
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