| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3080 |
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| Symbol | |
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| ID | 5604352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3389712 |
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| End bp | 3390152 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640938621 |
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| Product | phenylacetic acid degradation protein PaaD |
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| Protein accession | YP_001479309 |
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| Protein GI | 157371320 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.378312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCCA ATACGCCACA GGCACTGGCG CAACGCTGCG CCGAACAGAT GTTTCAACAG
GATACCTGTG CCCAGGCGAT GGGGATGCGG GTGGATGCGG TTGATGCCGG TTTCGCCCGG
GTCAGCATGA CCGTCGGTCC GCAGATGCTC AACGGCCACC AGACCTGCCA CGGCGGCCAA
CTTTTCAGCC TGGCGGACAC CGCCTTCGCC TATGCCTGCA ACAGTCAGGG GCTGGCGGCA
GTGGCCTCTG GCTGCAATAT CGAGTTTATC CGCCCGGCTC TGGCCGGCGA TCGCCTGACT
GCCAGCGCCG AGGTACGCCA TCAGGGTAAA ACCACCGGGC TGTATGACGT CGAAATCGTC
AACCAACTGG GCAAGACCGT CGCCTGGTTC CGCGGGCGGG CGCATCGCCT CGGCCATGCC
ATTTTAGGGG AACAACCATG A
|
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| Protein sequence | MNANTPQALA QRCAEQMFQQ DTCAQAMGMR VDAVDAGFAR VSMTVGPQML NGHQTCHGGQ
LFSLADTAFA YACNSQGLAA VASGCNIEFI RPALAGDRLT ASAEVRHQGK TTGLYDVEIV
NQLGKTVAWF RGRAHRLGHA ILGEQP
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