| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0223 |
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| Symbol | |
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| ID | 6114446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 274354 |
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| End bp | 274830 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631704 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001758619 |
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| Protein GI | 170724593 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.103741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAACAG ATGATTGCTG GTGTAGCGGT GAAATTGCCG ACCAAAGAGC CCGCAAAATA
GGTATTGAGA TGCTTGAGAA TGACCAAGGT TCACAGCGAC TTGGACTTAA GATCACCAAG
CACAATGCTC GACAATGTCA GGTTGAAATG AGTGTCACAT CAAACATGAC CAATGGCCAT
GACATTTGCC ATGGTGGGTA TATTTTCTCT TTAGCTGACA GTGCATTGGC GTTTGCTTGC
AATGGAGTAG GGGTTGTTGC GGTGACATCC GCAGCACAAA TCGACTTTAT GAACGCAGCA
AATCTCGGGG ACGTTCTATC GGCTGAGGCC ACTGTTAAAT TTCGTCAAGG ACGTCAACTG
ATATGCGATG TAAAAATTTG TAATCAAGAG AGCCAACTCA TCGCGCTTTG TCGTGGTCGC
CAAGTGAGTC TCAATAACAG AGCGCAGACT CAAAATACTA TAGGTAACAA CATATGA
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| Protein sequence | MQTDDCWCSG EIADQRARKI GIEMLENDQG SQRLGLKITK HNARQCQVEM SVTSNMTNGH
DICHGGYIFS LADSALAFAC NGVGVVAVTS AAQIDFMNAA NLGDVLSAEA TVKFRQGRQL
ICDVKICNQE SQLIALCRGR QVSLNNRAQT QNTIGNNI
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