| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3943 |
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| Symbol | |
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| ID | 4693858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4328920 |
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| End bp | 4329378 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639851692 |
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| Product | phenylacetic acid degradation protein PaaD |
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| Protein accession | YP_998668 |
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| Protein GI | 121610861 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.545833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTGCT CCACCGACAG ACCCAACCCC CAGGCCGTGG CCGACCATGT GCGCAGCGGC
ATGCTGGCCA AGGACCGCGC CACCCGGGGC CTGGGCATCC GCGTCACGGC CATGGGGCCG
GGGCAGGCCA CGCTGGAGAT GGTGGTGCGC GCCGACATGC TCAACGGCTT CGACATCTGC
CACGGCGGCT TCATCACCGT GCTGGCCGAT TCGGCGTTTG CCTTCGCTTG CAACTCGCGC
AACGTCCTGA CCGTGGCCAG CGGCCTGGAC ATCGATTTTC TGGCGCCCGC GCATGAAGGC
GACCATCTGA CGGCCGAGGC CACCGAGGTC GCGCTGGGCG GGCGCACCGG CTTGTACGAC
GTGAGCGTGC GCAATCAGCA CCATCAGGCC ATCGCCGTCT TGCGCGGGCG TTCGTACTGC
ATGCCGGGCC GGCCGACCGT GCCGCTGGAC GCCGGCTGA
|
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| Protein sequence | MPCSTDRPNP QAVADHVRSG MLAKDRATRG LGIRVTAMGP GQATLEMVVR ADMLNGFDIC
HGGFITVLAD SAFAFACNSR NVLTVASGLD IDFLAPAHEG DHLTAEATEV ALGGRTGLYD
VSVRNQHHQA IAVLRGRSYC MPGRPTVPLD AG
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