| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3567 |
|---|
| Symbol | paaI |
|---|
| ID | 3690904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 3892137 |
|---|
| End bp | 3892892 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637730022 |
|---|
| Product | phenylacetic acid degradation protein PaaI |
|---|
| Protein accession | YP_334932 |
|---|
| Protein GI | 76812075 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.060136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAACA AGCCGAACGT TGGGGACTCG TGTGGCGGGT CGTCGACGAT GCCGAACTCG
CGGGCGCCGC CGCACAACTC GCCCGAGAAC TTGCGCAACA GCCGACGCGG GCGATCGCGG
CGATCAAGCA GGCGATGCGT GCTAGCCTCA CCCATACGCT CGACCAGCAG CTCGATCTCG
AACGCGATCT TCAGCGCGAG CTCGGGCAAT CGTACGACTA CGCGGAAGGG GTGCGCGCGT
TCATCGAAAA GCGCGCCCCT CGCTTCGAAG GACGCTGAGA TGGCTGCACG CTCTCCCGAA
CGCTCGCCAA CGGCGACCGC AGAACGCTCC GCCGAAGCGC TCGCCCGCGC AACCGCCGAA
GCAATGTACG CCGCGGACGC CTGCAGCCGC AGCCTCGGCA TCGAGGTGCT CGAAGTGCGG
CCGGGCTACG CGCGCGCGCG CATGCCCGTG CGCGGCGATT TTCTGAACGG TCACCAGATC
TGCCATGGTG GGCTCGTCTT CACGCTCGCG GATTCGACCT TCGCGTTCGC CTGCAACTCG
TACAACATCA ATACGGTCGC AGCCGGCTGC TCGATCGAAT TCCTGCGCCC GGTGGCGGGC
GGCGACGTGC TCACCGCGGA AGCGACGGAG CAGACGCTGA ACGGCCGGCA CGGCATCTAC
GATATTCGCG TAACGAATCG GGCGGGAGAA ACCGTCGCGA TGTTCCGCGG CAAGTCGACT
CAAATCAAAG GGACGGTGAT CCCTGTAGAC CGTTAG
|
|---|
| Protein sequence | MPNKPNVGDS CGGSSTMPNS RAPPHNSPEN LRNSRRGRSR RSSRRCVLAS PIRSTSSSIS
NAIFSASSGN RTTTRKGCAR SSKSAPLASK DAEMAARSPE RSPTATAERS AEALARATAE
AMYAADACSR SLGIEVLEVR PGYARARMPV RGDFLNGHQI CHGGLVFTLA DSTFAFACNS
YNINTVAAGC SIEFLRPVAG GDVLTAEATE QTLNGRHGIY DIRVTNRAGE TVAMFRGKST
QIKGTVIPVD R
|
|---|
| |