Gene Bcen_2565 details

Gene Information

• Locus tag: Bcen_2565
• ID: 4092566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 2822708
• End bp: 2823160
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638015851
• Product: phenylacetic acid degradation protein PaaD
• Protein accession: YP_622437
• Protein GI: 107024110
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1; [TIGR02286] phenylacetic acid degradation protein PaaD

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATG CCACCGCCAC GCTCGACCCC GATTCGCTCG CCCGCGCCAC CGCGCAGGCC 
ATGTACGACG CCGACGCCTG CAGCCGTGCG TTCGGCATGG AAATCGCCGA AGTACGCGCA 
GGCTACGCCC GCCTTCAGAT GCGCGTGCGG CCCGAATTCC TGAACGGGCA CCAGACCTGC 
CACGGCGGGA TCATCTTCAC GCTCGCCGAT TCGACGTTCG CGTTCGCGTG CAACTCGTAC 
AACCTGAATG CGGTCGCGGC CGGCTGCTCG ATCGAATTCC TCCGCCCCGT GCACGGCGGC 
GACCTGCTGA CGGCCGAGGC GATCGAGCAG GCGCGTGCCG GCCGCCACGG CATCTACGAC 
ATTCGCGTCA CGAACCAGAC AGGCGAGACG GTCGCGATGT TTCGCGGCAA ATCCGCCCAG 
ATCAAGGGCA CGGTCATCCC GGAAGACCAC TGA 

 

Protein sequence

MTNATATLDP DSLARATAQA MYDADACSRA FGMEIAEVRA GYARLQMRVR PEFLNGHQTC 
HGGIIFTLAD STFAFACNSY NLNAVAAGCS IEFLRPVHGG DLLTAEAIEQ ARAGRHGIYD 
IRVTNQTGET VAMFRGKSAQ IKGTVIPEDH