| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2478 |
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| Symbol | |
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| ID | 5192182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2827878 |
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| End bp | 2828318 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586931 |
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| Product | phenylacetic acid degradation protein PaaD |
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| Protein accession | YP_001267797 |
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| Protein GI | 148547695 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAG TGGAACTGGC ACAAGCCTGT GCCGACGCCA TGTACGCCCG CGACCCGGCC
ACTCAGGGCC TGGGCATCAG CCTGCTGGAT GCTGGCCCAG GCCGGGCCAG CTTGCGCATG
GCGGTACGTG CCGACATGAT CCAGGGGCAT GGCACCTGCC ATGGCGGTTT CCTGTTCGCG
TTGGCCGATT CGGCGTTCGC CTTCGCCTGC AATAGCTACG ACCAGGCCAC GGTGGCGCTG
GGCTGCACCA TCGACTACCT GGCCCCGGCG CTGCGCGATG ACGTGCTCAC CGCCCACGCC
AGCGAAGTCA GCCGCAAAGG CCGCACCGGC CTGTACGACG TGCGTATCGA CAACCAGCGT
GGTGAGCTGG TGGCGATGTT CCATGGCAAA TCCTACAAAG TGCGCGGCAC CGTGCTGGCG
CAGGAGACGC AAGATGAATG A
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| Protein sequence | MTEVELAQAC ADAMYARDPA TQGLGISLLD AGPGRASLRM AVRADMIQGH GTCHGGFLFA
LADSAFAFAC NSYDQATVAL GCTIDYLAPA LRDDVLTAHA SEVSRKGRTG LYDVRIDNQR
GELVAMFHGK SYKVRGTVLA QETQDE
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