| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1498 |
|---|
| Symbol | |
|---|
| ID | 5694335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1787765 |
|---|
| End bp | 1788214 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641264093 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001529379 |
|---|
| Protein GI | 158521509 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC ATTCTGATCT TGAGCCTGGA TTTGAAGCCG CCATCCGGCA AACCATGGCC
ACCCGTTCAC CCTATTGGTC GTTGCTGGGC ATCGAACTTT TGAAAATCAA AAAAGGCTGG
GCCAAGCTCC ATCTGCCGTT TGATAAAAAA CTGACCCATC CCTATGGCAT CGCCCATGGC
GGGGCCATTT TTTCCCTGGC AGACTCGGCC GTGGCCATGG CCCTGCTGGG GGTTGTGGCG
CCGGAAGACA AGTTTGTCAC TGTAGAAATG AAAATCAATT ACCTCAGTAC ATTCACGGAC
GGTGCCCTGA CCGCCGAAGC CTGTATTGTT CACCAGGGAC GGCAGACGGC ACTGGGCGAT
GTCGATGTCC GTAATGAAGC CGGCCACCTG ATCGCCAAAG GGACGGCCAC CTATATGATT
ATCAAAGGTT TACAGACGCC GGATGGGTAA
|
|---|
| Protein sequence | MNTHSDLEPG FEAAIRQTMA TRSPYWSLLG IELLKIKKGW AKLHLPFDKK LTHPYGIAHG
GAIFSLADSA VAMALLGVVA PEDKFVTVEM KINYLSTFTD GALTAEACIV HQGRQTALGD
VDVRNEAGHL IAKGTATYMI IKGLQTPDG
|
|---|
| |