Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2692 |
Symbol | |
ID | 6244175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 3045605 |
End bp | 3046066 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642594487 |
Product | phenylacetic acid degradation protein PaaD |
Protein accession | YP_001858910 |
Protein GI | 186477440 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 [TIGR02286] phenylacetic acid degradation protein PaaD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.250107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGC AACCCGACGT TGGCAACGCC ATGACAGCCG ACGAACTCGC CCGCGCAACC GCCGAAGCCA TGTATGCAAA CGACGCCTGC AGCAAGGCAC TCGGCATCGA AATCGTCGAA GTGCGCGCCG GCTACGCGCG CCTGCGCATG AACGTACGGC CCGACTTTCT GAACGGTCAC CAGATATGTC ACGGTGGCCT GATATTCACC CTGGCCGACT CGGCATTCGC GTTCGCCTGT AACTCGTACA ACATCAACAC CGTCGCAGCG GGCTGTTCCA TCGAGTTTCT GCGCCCCGTG CAAGCTGACG AGGTTCTCAC GGCAGAAGCA GTTGAGCAGA CATTGAGCGG CCGCAACGGC ATCTACGACA TTCGCGTCAC GAATCGCGCA AACGAGATCG TTGCGATGTT TCGCGGCAAG TCCGCGCAGA TCAAAGGCAC GGTGATCCCC GTCGACAACT GA
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Protein sequence | MSTQPDVGNA MTADELARAT AEAMYANDAC SKALGIEIVE VRAGYARLRM NVRPDFLNGH QICHGGLIFT LADSAFAFAC NSYNINTVAA GCSIEFLRPV QADEVLTAEA VEQTLSGRNG IYDIRVTNRA NEIVAMFRGK SAQIKGTVIP VDN
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