Gene Acel_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1660 
Symbol 
ID4485245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1868946 
End bp1869440 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID639730449 
Productphenylacetic acid degradation protein PaaD 
Protein accessionYP_873418 
Protein GI117928867 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.388826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.270829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGG ATGACGCGAC GGACCGTACG CCGGATGCTG CGAGCGACTA TCCACCGGCC 
GGTGATCCGC AGAATGCGGA AGAGCGCGCC CGGCGCTGCG CCGAGGTGAT GTACCGGGCT
GATGCCGCCA GTCAGCGGTT AGGGATTTCC ATCGTGGAGA TCGCTCCCGG CCGGGCTGTC
GCCACGATGA CGGTCCGCGA CGACATGGTG AATGGCCACG GTGTCTGTCA CGGTGGCTTC
GTATTTGCCC TGGCTGACAC GGCGTTCGCC TTTGCGTGCA ATTCTTACGG CCGGGTCGCC
GTCGCCGCTG GTGCCGACAT TACGTTCGTT CAGCCGGCGG TTGCCGGCGA AACCTTGACG
GCCGAGGCGG TGGAACGCAT TCGGTACGGC CGATCGGGTC TGTACGACGT GACGGTCCGG
GGCACGGACG GCCGCTGCAT CGCCGAATTT CGCGGCCGCA GCCGGTTGAT GGATCGTGAG
CTCCTCGACG GCTAG
 
Protein sequence
MAADDATDRT PDAASDYPPA GDPQNAEERA RRCAEVMYRA DAASQRLGIS IVEIAPGRAV 
ATMTVRDDMV NGHGVCHGGF VFALADTAFA FACNSYGRVA VAAGADITFV QPAVAGETLT
AEAVERIRYG RSGLYDVTVR GTDGRCIAEF RGRSRLMDRE LLDG