| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0232 |
|---|
| Symbol | |
|---|
| ID | 4461308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 274155 |
|---|
| End bp | 274583 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639700987 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844368 |
|---|
| Protein GI | 116747681 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000358883 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.422713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGGATG AAGCAGTGAG AGAAGCGATT GTCCGGCGGA TGTCGGAAGA ACCTTTTGCA
AACAAGCTCG GAATACGGCT CGTCGCGATC GAGGCGGGTT ATTCGAAGGT CAGGATGGAG
GTCACTTCGG AGATGGAAAA CCTGTGCGGC ATGGCCCATG GAGGGGCCGT CTTCGCGCTG
GCCGACGCCG CTTTCGAGAC CGCCTCGAAT TCTCACGGCA CGGTGGCTGT GGCCCTCAGC
ATGACCATCA CCTACCTGGC CGCCAGCTCG GCGGGCGCAG TGCTTGTCGC CGAGGCCACG
GAGGTCAATC GGACCCGGAA AACGGCGTGC TACGATATTC GCGTCCACGA CGGGGACGAA
AAGTTGATCG CGATGTGCCA GGCCACGGTG TACCGGAAGG AAACCCCGCT GCCGTACCTC
GGAGTCTGA
|
|---|
| Protein sequence | MMDEAVREAI VRRMSEEPFA NKLGIRLVAI EAGYSKVRME VTSEMENLCG MAHGGAVFAL
ADAAFETASN SHGTVAVALS MTITYLAASS AGAVLVAEAT EVNRTRKTAC YDIRVHDGDE
KLIAMCQATV YRKETPLPYL GV
|
|---|
| |