Gene Pisl_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1354 
Symbol 
ID4616514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1232506 
End bp1232922 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content51% 
IMG OID639784442 
Producthypothetical protein 
Protein accessionYP_930859 
Protein GI119872852 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTTG AGGAGGTTAA TAAGTTTATA TACTCTGCCG AGCCTATTAT GGCGTTTCTC 
GGTTATAGAC TTGTGGAGCT TTCAGAGGGA CGCGCCTGTG CCGAGTTTAA TATGTCGCCA
AATGTACAAA GGGTAGGTGG GGTGTTACAC GGCGGGGTTA TCATGGCTGT GTTAGACGAG
ACCATGGGCT TCGCCGCCTT GACTCTAAAC GAGGGGGTTG ATCAAGTCAC CGTAGAGCTT
AAGGTGAACT TCCTAGAGCC AGGCGTGGAG GGGCCGTTTA GAGTATGTGG CACTGTGGTG
AGGAGAGGGA GTAGGATTGT GGTTGTAGAA GGCGAGGTGG TAGACAGCAG GGGGCGTCTC
ATAGCTAAAG CCCTAGGCAC TTGGTATTAC ATGTCGAAGA GAGTAGGCGA TAGATAA
 
Protein sequence
MGVEEVNKFI YSAEPIMAFL GYRLVELSEG RACAEFNMSP NVQRVGGVLH GGVIMAVLDE 
TMGFAALTLN EGVDQVTVEL KVNFLEPGVE GPFRVCGTVV RRGSRIVVVE GEVVDSRGRL
IAKALGTWYY MSKRVGDR