Gene Ping_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0658 
Symbol 
ID4626895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp843761 
End bp844201 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content42% 
IMG OID639795858 
Productphenylacetic acid degradation protein PaaD 
Protein accessionYP_942110 
Protein GI119944430 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAATA GTCAAGAATT AGCATGGCGT TGTGCCAAAA AAATGTATAA CAATGATGCT 
TGCTCTAATT TCTTAGGAAT GAAAATCGAA GACATGGGTA AGGGATATGC GGTGCTTAAT
ATGGTTGTCA GTAACACTAT GTTAAACGGT TTTCCAAGTT GCCATGGCGG AATGATTTTT
TCCCTTGCAG ATTCAGCCTT TGCCTTTGCA TGTAACAGTG AGAATCAGAC TGCTGTGGCT
GCGGGTTGCA ATATTGAATA TCTTCGCCCG GGGTTTGAGG GCGACATACT TACGGCAACG
GCGCATATGA AATCCCAGGG AAAAGTAACC GGTACCTATG ATGTTGAAGT CACCAATCAA
CAGCAAAAAT TGGTCGCTCT ATTTAGAGGG AAAGCGTATC GGTTAGGCAC TCAAATATTA
GGAGATAACA ACAATGATTA A
 
Protein sequence
MENSQELAWR CAKKMYNNDA CSNFLGMKIE DMGKGYAVLN MVVSNTMLNG FPSCHGGMIF 
SLADSAFAFA CNSENQTAVA AGCNIEYLRP GFEGDILTAT AHMKSQGKVT GTYDVEVTNQ
QQKLVALFRG KAYRLGTQIL GDNNND