| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0152 |
|---|
| Symbol | |
|---|
| ID | 4955288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 163003 |
|---|
| End bp | 163407 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640179305 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001111526 |
|---|
| Protein GI | 134298030 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.149179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATGAAT TAAGACAGCA GTTATTCCAA TTTACAAAGG AAAATCCCTT TAATAAGATG
ATGAATCTGG AAGTCACCGA ATTAAAACCG GGTGAATCGT GCATCGAAAT TACAGTCAAT
ACGAATCACC TGAATCCCCG GGGGAAGTTG CATGGAGGAG TTATCTCCGC CTTGGCAGAT
ACGGCCATGG GAGTGGCTAT CCGCACCTTG GGAAAGGCTG GTGTAACGGT AAATTTAAAT
ACAAATTTTA TCGCCCCTGG GAACCCTGGG GATCGAGTTG TAGCCCGAGG CAAAGTGGTT
CATGAAGGAA GCACGCTAAT TTCTGCGGAG TGCACCCTAA CAAGGGGTGA AGACATTCTG
GCCCGCTCTA CCGGAGTATG GTTTATTGTC CAAGATACAA ATTAA
|
|---|
| Protein sequence | MDELRQQLFQ FTKENPFNKM MNLEVTELKP GESCIEITVN TNHLNPRGKL HGGVISALAD
TAMGVAIRTL GKAGVTVNLN TNFIAPGNPG DRVVARGKVV HEGSTLISAE CTLTRGEDIL
ARSTGVWFIV QDTN
|
|---|
| |