Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2751 |
Symbol | |
ID | 8020422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2915743 |
End bp | 2916204 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644831538 |
Product | phenylacetic acid degradation protein PaaD |
Protein accession | YP_002982694 |
Protein GI | 241664334 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 [TIGR02286] phenylacetic acid degradation protein PaaD |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00224854 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGAAA CGACCCTCCA CGATGCGCAG GCCCTGGCTG AAGCGGCCTG CAAAAGCATG TTCGACGCTG ATGCCTGCAC CCGCTGGCTC GGCATGCGCG TGGAGGCGGT CGCGCCCGGC TATGCACGGC TGTCGATGGC GGTGCGGCCT GAATTCCTCA ACGGGCATCG CACCTGCCAT GGTGGGCTCA TCTTCACGCT CGCCGACTCG GCTTTTGCGT TTGCCTGCAA CAGCCACAAC CACAACACGG TGGCGGCTGG TTGCAGCGTC GAATTCCTGC GCCCGGCACA CGGCGGCGAT GTGCTCGTCG CAGAGGCAAC CGAGCAGGTT TTATCCGGTC GCCATGGTAT CTACGACGTA CGCGTAACAA ACCAGGCCGG CGAGGTGGTC GCCATGTTTC GAGGGAAGTC CGCGCAGATT CGCGGCCCGG CCATTCCGGT CACTGGCAGC GCAGAACCCT AG
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Protein sequence | MTETTLHDAQ ALAEAACKSM FDADACTRWL GMRVEAVAPG YARLSMAVRP EFLNGHRTCH GGLIFTLADS AFAFACNSHN HNTVAAGCSV EFLRPAHGGD VLVAEATEQV LSGRHGIYDV RVTNQAGEVV AMFRGKSAQI RGPAIPVTGS AEP
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