Gene BTH_I2903 details

Gene Information

• Locus tag: BTH_I2903
• Symbol: paaD
• ID: 3849116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 3338628
• End bp: 3339092
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637842571
• Product: phenylacetic acid degradation protein PaaD
• Protein accession: YP_443410
• Protein GI: 83721405
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1; [TIGR02286] phenylacetic acid degradation protein PaaD

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00325077
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAAC GCTCTCCCAC GGCAACCGCC GAACGCTCCG CCGAAGCGCT TGCCCGCGCG 
ACCGCCGAAG CAATGTTTGC CGCGGACGCC TGCAGCCGCG GCCTCGGCAT CGAGCTGCTC 
GAAGTGCGGC CGGGCTATGC GCGCACGTGC ATGCCGGTGC GCCCGGATTT TCTGAACGGC 
CACCAGATCT GTCACGGCGG ACTCATCTTC ACGCTCGCGG ATTCAACGTT CGCGTTCGCG 
TGCAACTCGT ACAACGTCAA CACCGTCGCG GCCGGCTGCT CGATCGAATT CCTGCGGCCG 
GTGGCGGGCG GCGACGTGCT CACCGCAGAG GCGACTGAGC AGACGCTGAA CGGCCGGCAC 
GGCATCTACG ATATTCGCGT AACGAACCGG GCGGGAGAAA CCGTCGCGAT GTTCCGCGGC 
AAATCGACCC AAATCAAAGG GACGGTGATC CCTATAGACC GTTAG 

 

Protein sequence

MTERSPTATA ERSAEALARA TAEAMFAADA CSRGLGIELL EVRPGYARTC MPVRPDFLNG 
HQICHGGLIF TLADSTFAFA CNSYNVNTVA AGCSIEFLRP VAGGDVLTAE ATEQTLNGRH 
GIYDIRVTNR AGETVAMFRG KSTQIKGTVI PIDR