More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_5913 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010676  Bphyt_5913  response regulator receiver protein  100 
 
 		 163 aa  333  5e-91  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_4785  response regulator receiver protein  47.86 
 
 		 118 aa  99.4  2e-20  Burkholderia phymatum STM815  Bacteria  normal  0.526141  normal  0.692787 
 
 
-
 
NC_010681  Bphyt_3698  response regulator receiver protein  38.98 
 
 		 125 aa  89  2e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819112  hitchhiker  0.0000139648 
 
 
-
 
NC_010623  Bphy_5333  response regulator receiver protein  42.86 
 
 		 143 aa  84  9e-16  Burkholderia phymatum STM815  Bacteria  normal  1  hitchhiker  0.00741139 
 
 
-
 
NC_010681  Bphyt_1702  response regulator receiver protein  41.53 
 
 		 145 aa  82.8  0.000000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_5729  response regulator receiver protein  43.14 
 
 		 145 aa  82.4  0.000000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.327194  normal  1 
 
 
-
 
NC_009441  Fjoh_0544  two component transcriptional regulator  41.88 
 
 		 227 aa  80.5  0.000000000000008  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010508  Bcenmc03_1106  response regulator receiver protein  45.63 
 
 		 119 aa  80.5  0.000000000000009  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  40 
 
 		 369 aa  79  0.00000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  42.2 
 
 		 229 aa  78.6  0.00000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal  1 
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  44.71 
 
 		 316 aa  77.4  0.00000000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007952  Bxe_B0483  response regulator receiver domain-containing protein  47.5 
 
 		 116 aa  77  0.0000000000001  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_01810  transcriptional regulatory protein  42.99 
 
 		 226 aa  76.6  0.0000000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  44.44 
 
 		 353 aa  77  0.0000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_011146  Gbem_2025  response regulator receiver sensor signal transduction histidine kinase  36.07 
 
 		 452 aa  76.3  0.0000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4410  response regulator receiver protein  36.67 
 
 		 131 aa  76.3  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.686937 
 
 
-
 
NC_007948  Bpro_2468  PAS/PAC sensor hybrid histidine kinase  49.43 
 
 		 1049 aa  76.3  0.0000000000002  Polaromonas sp. JS666  Bacteria  normal  0.858637  normal  0.0946099 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  38.89 
 
 		 170 aa  76.3  0.0000000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_012918  GM21_2194  response regulator receiver sensor signal transduction histidine kinase  35.48 
 
 		 452 aa  75.5  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.514859 
 
 
-
 
NC_009675  Anae109_1850  response regulator receiver protein  40.35 
 
 		 126 aa  75.1  0.0000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.549411  normal  1 
 
 
-
 
NC_007517  Gmet_2712  response regulator receiver sensor signal transduction histidine kinase  37.5 
 
 		 414 aa  75.1  0.0000000000004  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_6598  response regulator receiver protein  38.05 
 
 		 122 aa  74.3  0.0000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0263146  normal  0.165096 
 
 
-
 
NC_010623  Bphy_5170  response regulator receiver protein  38.1 
 
 		 225 aa  73.9  0.0000000000008  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.916187 
 
 
-
 
NC_002947  PP_3833  response regulator receiver protein  35.09 
 
 		 117 aa  73.6  0.000000000001  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_1937  response regulator receiver protein  35.09 
 
 		 117 aa  73.9  0.000000000001  Pseudomonas putida F1  Bacteria  normal  0.29733  normal  1 
 
 
-
 
NC_007354  Ecaj_0304  response regulator PleD  35.04 
 
 		 458 aa  73.2  0.000000000001  Ehrlichia canis str. Jake  Bacteria  normal  0.0864091  n/a   
 
 
-
 
NC_007413  Ava_1566  response regulator receiver (CheY) modulated Serine phosphatase  37.61 
 
 		 396 aa  73.2  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.244929 
 
 
-
 
NC_014248  Aazo_0176  response regulator receiver modulated serine phosphatase  42.86 
 
 		 378 aa  73.6  0.000000000001  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  40.2 
 
 		 336 aa  73.2  0.000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_4016  response regulator receiver protein  46.25 
 
 		 116 aa  73.6  0.000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_1964  response regulator  43.48 
 
 		 568 aa  72.8  0.000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.58831  n/a   
 
 
-
 
NC_013061  Phep_4008  response regulator receiver  42.24 
 
 		 1374 aa  72.8  0.000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.702059  normal  1 
 
 
-
 
NC_010322  PputGB1_3548  response regulator receiver protein  35.09 
 
 		 117 aa  72.8  0.000000000002  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.0400953 
 
 
-
 
NC_013525  Tter_1098  two component transcriptional regulator, winged helix family  45 
 
 		 228 aa  73.2  0.000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_1062  response regulator receiver protein  43.37 
 
 		 120 aa  72.4  0.000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.58489  hitchhiker  0.0000344775 
 
 
-
 
NC_007952  Bxe_B2580  response regulator receiver domain-containing protein  37.17 
 
 		 150 aa  72.8  0.000000000002  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.102517 
 
 
-
 
NC_008255  CHU_3042  two-component response regulator  43.75 
 
 		 228 aa  72.8  0.000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.330896  normal  1 
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  34.55 
 
 		 234 aa  72.8  0.000000000002  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_011884  Cyan7425_2078  response regulator receiver modulated serine phosphatase  42.17 
 
 		 379 aa  72  0.000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.61197  normal  1 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  39.77 
 
 		 407 aa  72  0.000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.142048 
 
 
-
 
NC_013161  Cyan8802_1870  response regulator receiver modulated serine phosphatase  37.89 
 
 		 379 aa  72  0.000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  0.177859  normal  1 
 
 
-
 
NC_011365  Gdia_2688  two component transcriptional regulator PhoB, winged helix family  39.33 
 
 		 243 aa  72.4  0.000000000003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0901925  normal  0.494683 
 
 
-
 
NC_011726  PCC8801_1844  response regulator receiver modulated serine phosphatase  37.89 
 
 		 379 aa  72  0.000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010625  Bphy_7238  response regulator receiver protein  34.78 
 
 		 185 aa  72.4  0.000000000003  Burkholderia phymatum STM815  Bacteria  normal  0.24892  normal  0.77163 
 
 
-
 
NC_011004  Rpal_5261  two component transcriptional regulator, winged helix family  43.75 
 
 		 237 aa  72.4  0.000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.909356  n/a   
 
 
-
 
NC_009485  BBta_1991  two component transcriptional regulator  43.75 
 
 		 235 aa  72.4  0.000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  43.75 
 
 		 230 aa  71.6  0.000000000004  Caulobacter sp. K31  Bacteria  normal  1  normal  0.281853 
 
 
-
 
NC_007799  ECH_0773  response regulator PleD  34.19 
 
 		 458 aa  71.6  0.000000000004  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_0500  response regulator receiver sensor signal transduction histidine kinase  35.9 
 
 		 373 aa  72  0.000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  43.53 
 
 		 222 aa  71.2  0.000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_011662  Tmz1t_1367  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  36.75 
 
 		 905 aa  71.6  0.000000000005  Thauera sp. MZ1T  Bacteria  normal  0.0722784  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  36.45 
 
 		 223 aa  71.6  0.000000000005  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  46.43 
 
 		 217 aa  71.2  0.000000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_1485  response regulator receiver  41.98 
 
 		 235 aa  71.2  0.000000000005  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.236897  n/a   
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  37.38 
 
 		 272 aa  71.2  0.000000000006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal  1 
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  38.33 
 
 		 348 aa  71.2  0.000000000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0932  response regulator receiver sensor signal transduction histidine kinase  36.52 
 
 		 374 aa  70.9  0.000000000007  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_3616  response regulator receiver Signal transduction histidine kinase  40.52 
 
 		 393 aa  70.9  0.000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159723  normal  0.789101 
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  33.87 
 
 		 345 aa  70.9  0.000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_1278  sensory box protein/response regulator  38.32 
 
 		 705 aa  70.5  0.000000000009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.517683  n/a   
 
 
-
 
NC_009675  Anae109_0930  response regulator receiver protein  44.44 
 
 		 456 aa  70.5  0.000000000009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.139996  normal  0.100238 
 
 
-
 
NC_009483  Gura_2299  response regulator receiver protein  38.38 
 
 		 275 aa  70.5  0.000000000009  Geobacter uraniireducens Rf4  Bacteria  normal  0.0218685  n/a   
 
 
-
 
NC_007298  Daro_1632  response regulator receiver  34.55 
 
 		 123 aa  69.7  0.00000000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  42.35 
 
 		 317 aa  70.1  0.00000000001  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_2789  response regulator receiver domain-containing protein  42.68 
 
 		 122 aa  70.1  0.00000000001  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_0650  response regulator receiver protein  37.07 
 
 		 123 aa  70.5  0.00000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.438565  normal  1 
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  38.66 
 
 		 381 aa  70.1  0.00000000001  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6643  response regulator receiver protein  33.05 
 
 		 126 aa  70.1  0.00000000001  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.00000647655  normal  1 
 
 
-
 
NC_008312  Tery_0921  response regulator receiver modulated serine phosphatase  36.46 
 
 		 378 aa  70.5  0.00000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2649  response regulator receiver protein  33.33 
 
 		 122 aa  70.5  0.00000000001  Thauera sp. MZ1T  Bacteria  normal  0.857048  n/a   
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  33.63 
 
 		 363 aa  70.5  0.00000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_4784  response regulator receiver protein  36.21 
 
 		 131 aa  70.1  0.00000000001  Burkholderia phymatum STM815  Bacteria  normal  0.724017  normal  0.683358 
 
 
-
 
NC_011831  Cagg_2051  two component transcriptional regulator, winged helix family  41.25 
 
 		 247 aa  68.9  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.520505  normal  1 
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  37.96 
 
 		 230 aa  69.3  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_007516  Syncc9605_2427  two component LuxR family transcriptional regulator  42.5 
 
 		 245 aa  69.3  0.00000000002  Synechococcus sp. CC9605  Bacteria  normal  0.27075  normal  1 
 
 
-
 
NC_007517  Gmet_2790  response regulator receiver sensor signal transduction histidine kinase  40.48 
 
 		 463 aa  69.3  0.00000000002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  40.23 
 
 		 488 aa  69.3  0.00000000002  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.182398 
 
 
-
 
NC_009943  Dole_2810  response regulator receiver protein  41.98 
 
 		 127 aa  68.9  0.00000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0130618  n/a   
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  45.68 
 
 		 377 aa  68.9  0.00000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_007413  Ava_4702  response regulator receiver Signal transduction histidine kinase  34.91 
 
 		 381 aa  68.9  0.00000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0901362  normal  1 
 
 
-
 
NC_007484  Noc_0130  response regulator receiver  31.4 
 
 		 121 aa  68.9  0.00000000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_1816  periplasmic sensor hybrid histidine kinase  44.44 
 
 		 977 aa  68.6  0.00000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  0.218789  normal  0.39116 
 
 
-
 
NC_007796  Mhun_0493  response regulator receiver sensor signal transduction histidine kinase  41.98 
 
 		 440 aa  68.9  0.00000000003  Methanospirillum hungatei JF-1  Archaea  normal  0.274957  normal  1 
 
 
-
 
NC_011369  Rleg2_3066  two component transcriptional regulator, LuxR family  43.53 
 
 		 305 aa  68.9  0.00000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_1422  response regulator receiver sensor signal transduction histidine kinase  38.89 
 
 		 361 aa  68.6  0.00000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008340  Mlg_2054  response regulator receiver protein  37.8 
 
 		 140 aa  68.9  0.00000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.0880044 
 
 
-
 
NC_009972  Haur_1343  response regulator receiver protein  33.62 
 
 		 121 aa  68.6  0.00000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0922  response regulator receiver protein  43.75 
 
 		 459 aa  68.2  0.00000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_41160  Response regulator  43.75 
 
 		 261 aa  68.2  0.00000000004  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_4918  two component transcriptional regulator  41.25 
 
 		 234 aa  68.6  0.00000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.134814 
 
 
-
 
NC_008009  Acid345_2233  response regulator receiver protein  39.74 
 
 		 131 aa  68.2  0.00000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.250128  normal  0.471472 
 
 
-
 
NC_010338  Caul_0611  response regulator receiver protein  40.37 
 
 		 121 aa  68.6  0.00000000004  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  40 
 
 		 229 aa  68.6  0.00000000004  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal  1 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  43.53 
 
 		 312 aa  68.6  0.00000000004  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1005  two component transcriptional regulator, winged helix family  45.68 
 
 		 227 aa  68.6  0.00000000004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000255449  n/a   
 
 
-
 
NC_007614  Nmul_A0335  response regulator receiver/GGDEF/EAL domain-containing protein  39.51 
 
 		 980 aa  68.2  0.00000000005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.376364  n/a   
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  43.9 
 
 		 383 aa  68.2  0.00000000005  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_008688  Pden_5113  response regulator receiver protein  34.91 
 
 		 121 aa  68.2  0.00000000005  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  41.3 
 
 		 295 aa  68.2  0.00000000005  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  36.29 
 
 		 376 aa  68.2  0.00000000005  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
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