More than 300 homologs were found in PanDaTox collection
for query gene Bxe_B2580 on replicon NC_007952
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007952  Bxe_B2580  response regulator receiver domain-containing protein  100 
 
 
150 aa  299  1e-80  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.102517 
 
 
-
 
NC_010676  Bphyt_6598  response regulator receiver protein  98.36 
 
 
122 aa  239  1e-62  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0263146  normal  0.165096 
 
 
-
 
NC_010676  Bphyt_4016  response regulator receiver protein  38.74 
 
 
116 aa  83.6  9e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0483  response regulator receiver domain-containing protein  36.94 
 
 
116 aa  82  0.000000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6643  response regulator receiver protein  42.59 
 
 
126 aa  79  0.00000000000002  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.00000647655  normal 
 
 
-
 
NC_010625  Bphy_7238  response regulator receiver protein  42.73 
 
 
185 aa  76.6  0.00000000000009  Burkholderia phymatum STM815  Bacteria  normal  0.24892  normal  0.77163 
 
 
-
 
NC_011831  Cagg_2064  response regulator receiver protein  39.29 
 
 
128 aa  76.6  0.0000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3698  response regulator receiver protein  45 
 
 
125 aa  76.3  0.0000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819112  hitchhiker  0.0000139648 
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  37.39 
 
 
394 aa  75.1  0.0000000000003  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_013131  Caci_6795  two component transcriptional regulator, winged helix family  38.46 
 
 
233 aa  75.1  0.0000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.510223  normal 
 
 
-
 
NC_009675  Anae109_3956  response regulator receiver protein  37.38 
 
 
128 aa  74.7  0.0000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.314568 
 
 
-
 
NC_011145  AnaeK_3907  response regulator receiver protein  34.71 
 
 
125 aa  74.7  0.0000000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1450  two component, sigma54 specific, Fis family transcriptional regulator  40.87 
 
 
448 aa  73.9  0.0000000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2412  two component, sigma54 specific, transcriptional regulator, Fis family  40.87 
 
 
448 aa  73.9  0.0000000000006  Anaeromyxobacter sp. K  Bacteria  normal  0.408341  n/a   
 
 
-
 
NC_011891  A2cp1_2499  two component, sigma54 specific, transcriptional regulator, Fis family  40.87 
 
 
448 aa  73.9  0.0000000000007  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0553938  n/a   
 
 
-
 
NC_011891  A2cp1_3985  response regulator receiver protein  33.94 
 
 
125 aa  73.2  0.000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4142  response regulator receiver domain-containing protein  42.02 
 
 
124 aa  73.2  0.000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.996905  n/a   
 
 
-
 
NC_007760  Adeh_3844  response regulator receiver domain-containing protein  34.58 
 
 
124 aa  72.4  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1850  response regulator receiver protein  34.75 
 
 
126 aa  71.6  0.000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.549411  normal 
 
 
-
 
NC_010676  Bphyt_5913  response regulator receiver protein  37.17 
 
 
163 aa  71.2  0.000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3298  response regulator receiver protein  36.75 
 
 
121 aa  71.2  0.000000000005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1974  response regulator receiver protein  35.04 
 
 
126 aa  70.9  0.000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1889  response regulator receiver protein  35.04 
 
 
126 aa  70.9  0.000000000005  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4273  response regulator receiver protein  44.04 
 
 
124 aa  70.5  0.000000000008  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2427  two component LuxR family transcriptional regulator  33.86 
 
 
245 aa  70.1  0.000000000009  Synechococcus sp. CC9605  Bacteria  normal  0.27075  normal 
 
 
-
 
NC_011004  Rpal_0146  response regulator receiver protein  32.48 
 
 
121 aa  70.1  0.000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4295  response regulator receiver protein  44.04 
 
 
124 aa  70.1  0.000000000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  37.5 
 
 
470 aa  69.7  0.00000000001  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_014212  Mesil_1847  CheA signal transduction histidine kinase  35.76 
 
 
934 aa  70.1  0.00000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.379526 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  37.7 
 
 
153 aa  69.7  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_0921  response regulator receiver modulated serine phosphatase  32.14 
 
 
378 aa  70.1  0.00000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0905  CheA signal transduction histidine kinase  35.9 
 
 
2164 aa  69.3  0.00000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.384813 
 
 
-
 
NC_008825  Mpe_A3186  twitching motility protein  36.61 
 
 
2092 aa  69.7  0.00000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.0988113  normal  0.323736 
 
 
-
 
NC_007604  Synpcc7942_1816  periplasmic sensor hybrid histidine kinase  37.61 
 
 
977 aa  68.9  0.00000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.218789  normal  0.39116 
 
 
-
 
NC_007760  Adeh_1193  CheA signal transduction histidine kinase  48.1 
 
 
706 aa  68.9  0.00000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0440291  n/a   
 
 
-
 
NC_013235  Namu_5029  two component transcriptional regulator, winged helix family  39.82 
 
 
225 aa  68.9  0.00000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1635  two component, sigma54 specific, transcriptional regulator, Fis family  37.61 
 
 
463 aa  68.9  0.00000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0346405  n/a   
 
 
-
 
NC_011891  A2cp1_1708  two component, sigma54 specific, transcriptional regulator, Fis family  37.61 
 
 
463 aa  68.9  0.00000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0143  response regulator receiver protein  34.29 
 
 
206 aa  68.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3548  response regulator receiver protein  33.94 
 
 
117 aa  68.2  0.00000000003  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0400953 
 
 
-
 
NC_011145  AnaeK_2678  CheA signal transduction histidine kinase  48.1 
 
 
705 aa  68.6  0.00000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.295272  n/a   
 
 
-
 
NC_013131  Caci_6788  two component transcriptional regulator, winged helix family  36.21 
 
 
230 aa  68.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.241896 
 
 
-
 
NC_007760  Adeh_1989  response regulator receiver domain-containing protein  36.11 
 
 
126 aa  68.6  0.00000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2239  two component, sigma54 specific, Fis family transcriptional regulator  37.61 
 
 
466 aa  68.6  0.00000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2773  CheA signal transduction histidine kinase  46.84 
 
 
705 aa  68.2  0.00000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.00107192  n/a   
 
 
-
 
NC_008254  Meso_0600  CheA signal transduction histidine kinase  41.86 
 
 
706 aa  68.6  0.00000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3338  response regulator receiver sensor signal transduction histidine kinase  33.64 
 
 
526 aa  68.2  0.00000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00782598 
 
 
-
 
NC_011884  Cyan7425_4410  response regulator receiver protein  30.95 
 
 
131 aa  68.2  0.00000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.686937 
 
 
-
 
NC_007413  Ava_3628  two component LuxR family transcriptional regulator  34.17 
 
 
225 aa  67.8  0.00000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.717242  normal  0.142765 
 
 
-
 
NC_011831  Cagg_0647  PAS/PAC sensor hybrid histidine kinase  32.46 
 
 
944 aa  67.8  0.00000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0902383 
 
 
-
 
NC_007964  Nham_1398  multi-sensor hybrid histidine kinase  36 
 
 
853 aa  68.2  0.00000000004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2887  LuxR family two component transcriptional regulator  34.17 
 
 
225 aa  67.8  0.00000000004  'Nostoc azollae' 0708  Bacteria  normal  0.526109  n/a   
 
 
-
 
NC_009483  Gura_2781  PAS/PAC sensor hybrid histidine kinase  42.86 
 
 
897 aa  68.2  0.00000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2262  response regulator receiver protein  33.88 
 
 
281 aa  67.8  0.00000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5170  response regulator receiver protein  39.6 
 
 
225 aa  67.8  0.00000000005  Burkholderia phymatum STM815  Bacteria  normal  normal  0.916187 
 
 
-
 
NC_012791  Vapar_4622  CheA signal transduction histidine kinase  37.3 
 
 
2022 aa  67.8  0.00000000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2143  integral membrane sensor hybrid histidine kinase  35.8 
 
 
755 aa  67.8  0.00000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0324  response regulator receiver protein  31.82 
 
 
126 aa  67.8  0.00000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.336165  n/a   
 
 
-
 
NC_009767  Rcas_4152  response regulator receiver protein  32.43 
 
 
122 aa  67.4  0.00000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.237344 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  36.04 
 
 
476 aa  67.4  0.00000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_008786  Veis_3017  CheA signal transduction histidine kinases  35.38 
 
 
1983 aa  67.4  0.00000000006  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0085  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  33.33 
 
 
738 aa  67.4  0.00000000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.127866 
 
 
-
 
NC_013093  Amir_5960  two component transcriptional regulator, winged helix family  35.71 
 
 
226 aa  67  0.00000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.891848  n/a   
 
 
-
 
NC_011992  Dtpsy_2897  CheA signal transduction histidine kinase  31.16 
 
 
2026 aa  67.4  0.00000000007  Acidovorax ebreus TPSY  Bacteria  normal  0.855039  n/a   
 
 
-
 
NC_011830  Dhaf_1740  two component transcriptional regulator, winged helix family  38.05 
 
 
225 aa  67  0.00000000007  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000204942  n/a   
 
 
-
 
NC_013501  Rmar_2408  PAS/PAC sensor hybrid histidine kinase  40.52 
 
 
647 aa  67.4  0.00000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.385618  n/a   
 
 
-
 
NC_013441  Gbro_4088  response regulator receiver  38.05 
 
 
231 aa  67  0.00000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2881  two component transcriptional regulator, LuxR family  30.47 
 
 
212 aa  67  0.00000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008228  Patl_1591  response regulator receiver protein  29.56 
 
 
266 aa  67  0.00000000008  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3300  multi-sensor hybrid histidine kinase  37.72 
 
 
1234 aa  67  0.00000000008  Shewanella putrefaciens CN-32  Bacteria  normal  0.881781  n/a   
 
 
-
 
NC_011138  MADE_00411  chemotaxis protein CheY  32.74 
 
 
121 aa  67  0.00000000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1801  PAS/PAC sensor hybrid histidine kinase  44.25 
 
 
522 aa  67  0.00000000009  Geobacter sp. M21  Bacteria  n/a    normal  0.0233266 
 
 
-
 
NC_010623  Bphy_4784  response regulator receiver protein  37.39 
 
 
131 aa  66.6  0.00000000009  Burkholderia phymatum STM815  Bacteria  normal  0.724017  normal  0.683358 
 
 
-
 
NC_013216  Dtox_3007  signal transduction histidine kinase, nitrogen specific, NtrB  31.19 
 
 
507 aa  66.2  0.0000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.738719  normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  36.7 
 
 
461 aa  66.2  0.0000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  37.19 
 
 
473 aa  66.2  0.0000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  36.11 
 
 
806 aa  66.2  0.0000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007777  Francci3_3288  two component transcriptional regulator  34.78 
 
 
272 aa  66.6  0.0000000001  Frankia sp. CcI3  Bacteria  normal  normal  0.234797 
 
 
-
 
NC_007925  RPC_4677  response regulator receiver domain-containing protein  31.36 
 
 
121 aa  66.2  0.0000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3202  response regulator receiver protein  34.21 
 
 
117 aa  66.2  0.0000000001  Pseudomonas putida W619  Bacteria  normal  0.529191  normal 
 
 
-
 
NC_013161  Cyan8802_4054  CheA signal transduction histidine kinase  33.07 
 
 
989 aa  66.6  0.0000000001  Cyanothece sp. PCC 8802  Bacteria  normal  0.264346  normal 
 
 
-
 
NC_010322  PputGB1_0288  two component, sigma54 specific, Fis family transcriptional regulator  37.61 
 
 
468 aa  66.6  0.0000000001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5333  response regulator receiver protein  36.7 
 
 
143 aa  66.6  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00741139 
 
 
-
 
NC_013440  Hoch_6875  response regulator receiver protein  33.04 
 
 
129 aa  66.6  0.0000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_4016  CheA signal transduction histidine kinase  33.07 
 
 
989 aa  66.6  0.0000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008782  Ajs_3574  CheA signal transduction histidine kinases  30.53 
 
 
2026 aa  66.2  0.0000000001  Acidovorax sp. JS42  Bacteria  normal  0.906934  normal  0.231875 
 
 
-
 
NC_009943  Dole_3272  PAS/PAC sensor hybrid histidine kinase  36.21 
 
 
962 aa  65.9  0.0000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  31.71 
 
 
383 aa  65.9  0.0000000002  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  36.29 
 
 
445 aa  65.5  0.0000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  36.29 
 
 
445 aa  65.5  0.0000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1702  response regulator receiver protein  34.51 
 
 
145 aa  65.9  0.0000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  34.48 
 
 
456 aa  65.5  0.0000000002  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  34.48 
 
 
456 aa  65.5  0.0000000002  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_007948  Bpro_1140  CheA signal transduction histidine kinases  36.13 
 
 
2070 aa  65.9  0.0000000002  Polaromonas sp. JS666  Bacteria  normal  normal  0.607614 
 
 
-
 
NC_011729  PCC7424_5086  response regulator receiver modulated diguanylate cyclase  34.58 
 
 
465 aa  66.2  0.0000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  37.17 
 
 
455 aa  65.5  0.0000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_008577  Shewana3_0576  multi-sensor hybrid histidine kinase  35.09 
 
 
1236 aa  65.5  0.0000000002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1865  response regulator receiver  33.33 
 
 
224 aa  65.9  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  0.59899  n/a   
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  36.61 
 
 
445 aa  65.5  0.0000000002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_02441  two-component response regulator  31.9 
 
 
242 aa  65.9  0.0000000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.72299  normal 
 
 
-
 
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