Gene Hoch_6875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6875 
Symbol 
ID8549299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9415676 
End bp9416065 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content63% 
IMG OID646391540 
Productresponse regulator receiver protein 
Protein accessionYP_003271232 
Protein GI262200023 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA CCGCGGAGTC CGGTGCGTCC GAGACCATCC TCGTCGTCGA TGACGATCCC 
GAAATTCTCG GCATGCTCGA TCTCCGGCTG GGTAAGCGCG GATATCGGGT GGTGAGCGCG
ATCGATGGCG AGGAGGCGCT GGAGCAGGCA CGCAAGGAGA AGCCGGCGCT GGTGGTCCTC
GACGTGATGA TGCCGCGCAT GAACGGCTGG GAAGTTGCGC GCGCGCTCCG TCAGGACCAG
GCCACCAGCA AGGTCAAGAT CGTCATGCTG ACCGCCATCG GCGCGCAGAT GAACGAGATG
ACTTCGCCGC TCTACGGCGT GGATGCTTAT CTCGACAAGC CCTTCGAGTT CTCGAAGCTC
GAGCAGACCA TCGCCGATCT GCTGGCCTGA
 
Protein sequence
MSKTAESGAS ETILVVDDDP EILGMLDLRL GKRGYRVVSA IDGEEALEQA RKEKPALVVL 
DVMMPRMNGW EVARALRQDQ ATSKVKIVML TAIGAQMNEM TSPLYGVDAY LDKPFEFSKL
EQTIADLLA