| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0576 |
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| Symbol | |
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| ID | 4476537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 671854 |
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| End bp | 675564 |
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| Gene Length | 3711 bp |
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| Protein Length | 1236 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725108 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_868221 |
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| Protein GI | 117919029 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA GTGAGCCGGA TCTCCAATTA AAATCGCCGA TCCAAAAGAA CTATAACCGC
GCCGTTTTTT ATACCTATAT CGGCGTGATT GTCCTGTCGT TGCTGACGGC GTGGATGTTT
TTCGATCGCC AGAAAACCCA GCAAATGGAG CAGCGCGAAG AGCAGGTTGA GCGTCACGTA
TTGCAAATCG ACTTGCTGTT GGAGTCGAGC ATCCGCGCGG TCAAGAGTCT GCGGGATGTG
GCCGTGGATC ACCTGCGCTT AGGTGAGCTA GTGCGTAAGG AGCGTTTACC GCAATACGGC
AAATTTAACG AGAGTGGTCA GTATTTTACC TTAGAGCCTA ACTACGCCAA GGGCGGTAAA
CCTTTTACCA ACATGGGGCG GATCACGGGC GCGGGTTCCC TCGATGGTCG CAGTGATAAG
TTCTACCAAG AGCTGGAAAT GCTGTTCGAG TTGTCGCTGT CTTTCCCCGT CGCCAAAGAA
GCGGCACCTA AAGCCTCGGC GATTTATTAT TTATCGCGCC AACGGATGAT GTCCTACTTC
CCGTGGACCA ACGGTGACCA GCGTTTTAGG GATGAGCTGC TCAATAAGAA ACAATTCCAA
TACGCTACCC CGGCGATGAA CCCGCAGCGC AGCGTGTTTT GGAGTGAGGC CTATGTCGAT
TCGACGGGCA AAGGCTTGCT GACCACCTTA GGTGTGCCCG TTTATCTCGA TGATGAGTTT
ATGGGCTCGA TCAACCTCGA CATGACCTTG GCCTCATTGG CGCGGCAAAT TCGGGTGTAC
TTCAAAATGC CTGGGACTGT GATCCTACTC GATCAGCAGA ACAATATTTT GTCCCACAGT
GACTTCGATG GCTCTGATAT CAATCGGGTG TATCACATCA GCCAGCGTAT TCCGTCTGAG
CTGCATTCGC TCCCCGAGTC TGAATTGTTC GATGCCCACG AAGGCATTAT TCGCAACGGT
TACTATATTC ACTCGGTCGC GCTGCATAAC GCGCCGTGGC GCTTGTTGTA TCTGCAGAAT
GAAGACGACC TGTTCCAAGA TTCGGTCGAA AAACTGCAGC TGACCTTTAT CCTCGTCGTC
ATCGCCCTGT CGGTGCTGGT GACCATAGTG CACTGGCAAA CGCGCCGCTC CTTCGTGAGC
CCCGCATCGC GCCTGTTGTC GCACTTAGAG GGCTGTTCCC AAGAGCCGCG TAAACCGCCG
GAAAAAATCA CTCCGGGGTG GGAACCTTGG TTCCTGCTGG TGAGCCGTAT CTTTGAGGAA
AACAAGCAAT ACACCCATCA TTTGGCCGAG CAGAATAAGC GACTCGACAA ATTGGTCGCA
CGCCGCACCG AGCGCTTAAA AGATGCGACC GAACGGCGCG AGCGGGAATA TGCGTTGTTG
CGCTCCTTAC TCGACTCCAT CCCAGAAGCC ATTGTCTTTA AAGATAAAGA AGGCAATTAC
CTCGGCTGTA ACAAGGCTGC CGAGCGGATG CTGGGTTACA CCGAAAGCGA GATGATTGGT
CTGTCGTCGG AGGATTTAAC CTCGCCGGAG ATGGGCATTC GTATTCGCGC CGAGGATGAG
CAGATCTTAA AAGATCGCAC GCCGCTGCGT TATCAAGAGA AGGTTGAGTT AGCGGGCAAA
CCTGTGTTGC TCGATACCCT TAAACTGCCT TTCTATAACC GTCGTGGCGA GCTGCAAGGC
TTGATTGCTG TGTGGCGCGA TGTGACGCGT GAGTACGAGT CCGCCGAGCA GTTACGCCTG
TCGGAGGAGC GTTACCATTT AGCGATGGAC GCGGTAGAAG ACGGTCTGTG GGACTGGTAT
CTGGATTCGG AGCATATTAT TTGCAACCCA TCCTATTATT CGATGCTGGG CTATAAACCC
AATGAATTCC CAGCGTTAGT GTCGGCAATT GATCAGTTGA CGCACCCCGA CGATAGAATT
CGAGTTGAAG AGTACCGTAA TCAGTATCTT GAAAACCCTG TCGATGCCTA CGAAATCGAG
TTTAGGATTT TAGGCAAAAA TGGCAGTTAT CACTGGGTGC TTTCCCGCGG TCGGGTGGTG
GAATTTACCG CCGATGGTCA GCCTAAGCGT ATGGTCGGTA CCCATAAGGA CATCACGCGC
CATAAGAGTA ACGAAGTGGC GCTGCTTGAA GCGAAGCAGG ACGCGGAACT GGCGAACCTG
TATAAGAGTG AATTCTTGGC GAATATGAGC CATGAAATCC GCACGCCAAT GAACGCCATT
ATCGGTATGT TGCAGTTAGC GCAGCGCACT TCGTTGACGG CACAGCAGAA GGATTATCTC
GAAAAAGCTG GTTTCTCGGC GCAGTCATTA CTGCGGATTA TTAACGATAT TCTCGACTTC
TCTAAGATTG AGGCGGGTAA ATTAGAGCTG GAGCGGGTGC CGTTCCCACT GGATAAAGTG
CTCGACCATG CCCTCGATCT CAACGCGCTT AAGGCGCAGG AGCAAGGCGT TGAGTTATTA
CTGTATGCGC CAGTGACGGC AGGCCTCATT CTTAAGGGCG ACCCGCTGCG TCTAGGCCAA
GTGCTGATCA ACCTGTTATC GAACGCAGTG AAGTTTACCC AATCCGGTGA AATTGAACTG
GGCTGCGAAG ATGTCGGCGA GCGCGACCAT CGAATTACCT TAAAATTTTG GGTGCGGGAT
ACGGGTATTG GGATCAGTAA AGATCAGCAG GAAAAACTGT TCGATGCCTT TGCCCAGGCC
GATGGTTCGA CGACCCGTAA GTACGGTGGC ACGGGATTAG GTTTATCGAT CAGTAAGCAT
TTGGTCTCCA TGATGGGCGG CAAGATGCAG GTGCAGAGTG AGTTAGGCGT CGGCAGTACC
TTCAGCTTTA CCATCAGCTT TGAGATTGCC GAAGAGGCTA AGGTTGAGCC CTTAGTGGTG
CCTGAAAAAC TCAATAATTT ACGCACACTT GTGGTGGATG ATAACCCGAC GGCGCTGCAA
ATTTATTCGG CGTTGATGCG GGATTTCCAC TTCGAGGTGG ATACTGCTGC AAGCGGCGCC
GAGGCGCTGT ATAAGTTGTC GCGGGATCCT ATCGATTTAT TGTTGCTCGA TTGGATGATG
CCAGAGATGG ATGGTGGCGA TGTGATCAGC GCCATCGATA CCATGGTGGC CGAAGGCCGC
ATCGCGAAAC GCCCCATTAT CATCATGATG ACCGCCTACG CGGCGGAACC TTTACAGCAC
GAAGTCGACA GTGCCAATGT GTTTGCCGTG TTGCAAAAGC CCTTTAAGGC ATCGAGTCTG
TTCGATGAGA TTATCGCCGC CTTTGCCGAT GAGCCAAGGC TCAATGTGGT GCAGCCTATT
GATGAACTGC CGGTAGAAGA GGGTGAACAT ACAGGGCTTG TGCTCTTGGT GGAAGATAAC
TTTATCAACC AACAGGTGGC GACTGAGCTG CTAAAGAGCG CAGGATACGA AGTCGTTGTT
GCAGGAAATG GACAAATTGC CCTCGATATT ATCGACTCGC GCCCCTTTGA TGCGGTATTA
ATGGATATTC AAATGCCTGT GATGGATGGT TTAACCGCGG CGCGGGCACT GCGTGAACGC
TTTAGTGCCG ATGTGCTACC TATTATCGCC ATGACAGCCC ATGCGATGTC GGGCGATCGA
GAAAAGAGTC TTGCGGCAGG GATGAATGCC CATATCACTA AGCCGATAGT GTTAACTGAA
CTGTTTGAAA CCTTATCGCA TTGGATAAAA CACAAGAATA ATCATCATTA A
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| Protein sequence | MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VLSLLTAWMF FDRQKTQQME QREEQVERHV
LQIDLLLESS IRAVKSLRDV AVDHLRLGEL VRKERLPQYG KFNESGQYFT LEPNYAKGGK
PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSRQRMMSYF
PWTNGDQRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYVD STGKGLLTTL GVPVYLDDEF
MGSINLDMTL ASLARQIRVY FKMPGTVILL DQQNNILSHS DFDGSDINRV YHISQRIPSE
LHSLPESELF DAHEGIIRNG YYIHSVALHN APWRLLYLQN EDDLFQDSVE KLQLTFILVV
IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITPGWEPW FLLVSRIFEE
NKQYTHHLAE QNKRLDKLVA RRTERLKDAT ERREREYALL RSLLDSIPEA IVFKDKEGNY
LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDE QILKDRTPLR YQEKVELAGK
PVLLDTLKLP FYNRRGELQG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY
LDSEHIICNP SYYSMLGYKP NEFPALVSAI DQLTHPDDRI RVEEYRNQYL ENPVDAYEIE
FRILGKNGSY HWVLSRGRVV EFTADGQPKR MVGTHKDITR HKSNEVALLE AKQDAELANL
YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTAQQKDYL EKAGFSAQSL LRIINDILDF
SKIEAGKLEL ERVPFPLDKV LDHALDLNAL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ
VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGISKDQQ EKLFDAFAQA
DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EEAKVEPLVV
PEKLNNLRTL VVDDNPTALQ IYSALMRDFH FEVDTAASGA EALYKLSRDP IDLLLLDWMM
PEMDGGDVIS AIDTMVAEGR IAKRPIIIMM TAYAAEPLQH EVDSANVFAV LQKPFKASSL
FDEIIAAFAD EPRLNVVQPI DELPVEEGEH TGLVLLVEDN FINQQVATEL LKSAGYEVVV
AGNGQIALDI IDSRPFDAVL MDIQMPVMDG LTAARALRER FSADVLPIIA MTAHAMSGDR
EKSLAAGMNA HITKPIVLTE LFETLSHWIK HKNNHH
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