| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3300 |
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| Symbol | |
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| ID | 5078373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3844834 |
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| End bp | 3848538 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500501 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001184811 |
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| Protein GI | 146294387 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.881781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGA GTGAGCCGGA TCTTCAACTA AAATCGCCGA TCCAAAAAAA TTACAACCGT
GCCGTTTTTT ATACGTACAT AGGCGTTATC GTCATGTCGT TATTAACTGC GTGGGTGTTT
TTTGACCGCC AGAAAACCCA GCAGATGGAA CAGCGTGAAG AGCAAGTTGA ACGACATGTG
TTGCAAATTG ATCTGTTGCT TGAGTCGAGT ATTCGTGCCG TAAAAAGTCT GCGTGATGTT
GCAGTCGATC ATTTGCGCTT AGGTGAGCTA GTTCGGAAAG ACCGTTTACC TGAGTACGGT
AAATTTAACG AAAGTGGTCA ATATTTTACC CTTGAGCCCA GTTATGCCAA GGGAGGCAAG
CCTTTCACTA ATATGGGAAG GATTACTGGT GCTGGATCGC TTGATGGTCG TAGTGACAAG
TTTTATCAAG AACTTGAGAT GCTATTTGAA TTATCTTTGT CTTTTCCCGT CGCGAAAGAA
GCCGCCCCTA AAGCGTCAGC TATTTATTAT TTATCCAGAC AAAGAATCAT GTCCTATTTT
CCTTGGACCA ATGATGATTT GCGATTTAGG GATGAACTCC TCAATAAGAA ACAGTTCCAG
TATGCGACTC CAGCGATGAA CCCGCAGCGC AGTGTGTTTT GGAGTGAGGC CTACATTGAT
TCAACGGGCA AAGGTTTGCT CACTACTTTG GGCGTTCCAA TTTATCTAGA TGATGAGTTT
ATTGGTTCTA TTAACCTAGA TATGACCCTT GCTTCACTTG CGCGGCAAAT CCGCGTTTAT
TTTAGAATGC CCGGCACTGT GATTTTGCTC GATCAACAGA ACAATATTTT ATCCCACAGT
GATTTTGACA GTTCCGATAT TAATCGGGTG TATCACATCA GTCAGCGCAT TCCATCTGAA
TTACATTCTT TACCTGAGTC TGAACTGTTC GATGCCCATG AAGGCATGAT CCGTAATGGC
TACTATATCC ACTCAGTCGC CTTACATAAC GCGCCTTGGC GTTTGTTGTA CTTACAAGAT
GAAGACGACC TATTCCAAGA TTCGTGGGAA AAATTGCAAC TGACGTTTAT TTTAGTGGTG
ATTGCGCTCT CAGTGCTGGT GACTATCGTG CATTGGCAAA CGCGTCGTTC TTTTGTTAGT
CCTGCATCAC GTCTTTTGTC GCACCTTGAG GGATGTTCCC AAGAACCGCG CAAACCGCCT
GAGAAAATTA CTCAGGGTTG GGAGCCTTGG TTTTTGTTGG TGAGTCGGAT TTTTGAAGAA
AATAAACAAT ATACTCATCA TCTTGCTGAG CAGAATAAGC GTCTCGATAA ACTTGTGGCG
CGGCGTACAG AGCGCTTGAA AGACACCACT GAGCGTCGTG AACGTGAGTA TGCACTGCTG
CGTTCGCTCC TTGATTCGAT TCCTGAGGCT ATTGTCTTCA AAGATAAAGA AGGCAACTAC
CTAGGTTGTA ACAAGGCTGC AGAGCGCATG CTGGGTTACA CCGAGAGTGA GATGATTGGC
CTATCATCAG AGGATCTTAC CTCACCGGAA ATGGGGATCC GTATTCGCGC CGAAGATCAA
CAAGTACTTA AAGATCGTAC ACCGCTGCGT TATCAAGAAA AGGTCGAGTT GGCGGGTAAA
CCCGTGTTAC TCGATACTCT CAAATTGCCA TTTTATAACC GCCGCGGTGA GTTGCTCGGA
TTAATCGCCG TATGGCGTGA TGTTACGCGA GAATATGAAT CTGCTGAACA ATTACGCTTA
TCTGAGGAAC GCTATCACTT AGCTATGGAT GCGGTAGAGG ATGGATTGTG GGACTGGTAT
TTAGATTCTG AGCAAATCAT CTGTAACCCC GCGTATTATT CGATGCTGGG GTATAAAACA
AATGAGTTCC CAGCGTTGGT ATCGGCAATT GATCATTTAA CTCACCCTGA TGATCGTATT
CGGGTGGAGG AATATCGTAA CCAGTATTTA CAAGATCCGG TTGATGCCTA TGAAATTGAG
TTTCGACTGT TAGGTAAGAA TGGTACCTAT CATTGGGTGC TTTGTCGTGG TCGGGTGGTG
GAATTTACCG CCGATGGTCA ACCTAAGCGG ATGCTGGGGA CACATAAAGA TATTACCAGA
CAAAAGAGTA ATGAAGTTGC CCTGTTAGAA GCTAAACAAG ATGCGGAACT GGCAAACCTC
TACAAGAGTG AGTTCTTGGC GAATATGAGC CATGAGATCC GCACGCCAAT GAACGCTATT
ATCGGTATGT TGCAGTTAGC GCAGCGCACT TCATTAACGC CGCAGCAAAA AGATTATCTC
GAAAAGGCGG GTTTCTCTGC TCAATCATTA TTACGAATTA TTAATGATAT TCTTGATTTT
TCTAAAATTG AGGCGGGTAA GCTTGAGCTT GAGCGGGTGC CATTTCCACT GGATAAAGTG
CTTGACCATG CGCTTGATCT TAATGCGCTC AAGGCTCAGG AGCAGGGGGT TGAACTCTTA
CTCTATGCCC CCGTCACCGC AGGGCTTATT CTTAAGGGCG ATCCGCTGCG TCTAGGCCAA
GTGCTGATAA ATCTATTATC GAATGCGGTC AAATTTACCC AATCGGGTGA AATTGAACTG
GGTTGTGAGG ATGTCGGCGA GCGAGATCAT CGCATTACCC TTAAATTCTG GGTGCGAGAT
ACCGGTATTG GTATTAGCAA AGACCAGCAG GAAAAACTCT TCGATGCCTT TGCACAAGCC
GATGGTTCCA CGACGCGTAA ATATGGGGGC ACAGGTTTAG GTTTATCGAT CAGTAAGCAT
CTCGTGTCTA TGATGGGCGG TAAGATGCAA GTACAAAGTG AGCTTGGCGT CGGCAGTACC
TTCAGTTTTA CCATCAGTTT TGAAATTGCC GAAGAAGCTA AGGTTGAGCC GCTAGTCGTA
CCTGAAAAAC TCAATAATTT ACGTACGTTA GTAGTTGATG ATAATCCAAC TGCACTGCAA
ATCTATTCTG CTGTGATGCG GGATTTCCAC TTTGAAGTGG ATACCGCCGC CAGTGGCGCC
GAAGCCCTGT ATAAACTGTC ACGGGATCCT ATCGATTTAT TATTGCTCGA CTGGATGATG
CCCGAAATGG ATGGCAGTGA TGTGATCAGT GCTATCGATA CTATGGTCGC TGAAGGCAGG
CTGGATAAGC GCCCTGTAAT TATTATGATG ACGGCTTACT CTGCAGAGCC TTTGCAGTAT
GAGGTGGAAA GTGCCAACGT ATTTGCTGTG CTGCAAAAAC CCTTTAAAGC ATCGAGTTTG
TTTGATGAGA TCATCGCCGC TTTTGCCGAT GAGCCGAGGT TAAATGTGGT TCAGTCCATG
GAAGAAACTG ACGTTGGCGA GCATACAGGT TTAGTGTTGC TGGTAGAGGA TAACTTTATC
AACCAACAAG TGGCGACTGA ATTACTTAAG AGCGCAGGCT ATGAAGTGGT GCTAGCCGAT
AATGGTCAAG TCGCGTTGGA TATTATCGAT TCCCGTCCCT TTGATGCGGT GTTGATGGAT
ATTCAAATGC CAGTGATGGA TGGATTAACG GCTGCAAGGG CGTTGCGTGA GCGTTATAGT
CCAGAAGAAC TGCCTATTAT TGCGATGACC GCCCATGCAA TGTCAGGTGA TAGGGAAAAA
AGTTTGGCAG CGGGAATGAA CGCCCATATT ACTAAACCCA TAGTGCTCAA TGAGCTATTT
GAGACGTTAA ATCACTGGAT CCAGCACAAG AACCAGCATA GTTGA
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| Protein sequence | MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VMSLLTAWVF FDRQKTQQME QREEQVERHV
LQIDLLLESS IRAVKSLRDV AVDHLRLGEL VRKDRLPEYG KFNESGQYFT LEPSYAKGGK
PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSRQRIMSYF
PWTNDDLRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYID STGKGLLTTL GVPIYLDDEF
IGSINLDMTL ASLARQIRVY FRMPGTVILL DQQNNILSHS DFDSSDINRV YHISQRIPSE
LHSLPESELF DAHEGMIRNG YYIHSVALHN APWRLLYLQD EDDLFQDSWE KLQLTFILVV
IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITQGWEPW FLLVSRIFEE
NKQYTHHLAE QNKRLDKLVA RRTERLKDTT ERREREYALL RSLLDSIPEA IVFKDKEGNY
LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDQ QVLKDRTPLR YQEKVELAGK
PVLLDTLKLP FYNRRGELLG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY
LDSEQIICNP AYYSMLGYKT NEFPALVSAI DHLTHPDDRI RVEEYRNQYL QDPVDAYEIE
FRLLGKNGTY HWVLCRGRVV EFTADGQPKR MLGTHKDITR QKSNEVALLE AKQDAELANL
YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTPQQKDYL EKAGFSAQSL LRIINDILDF
SKIEAGKLEL ERVPFPLDKV LDHALDLNAL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ
VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGISKDQQ EKLFDAFAQA
DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EEAKVEPLVV
PEKLNNLRTL VVDDNPTALQ IYSAVMRDFH FEVDTAASGA EALYKLSRDP IDLLLLDWMM
PEMDGSDVIS AIDTMVAEGR LDKRPVIIMM TAYSAEPLQY EVESANVFAV LQKPFKASSL
FDEIIAAFAD EPRLNVVQSM EETDVGEHTG LVLLVEDNFI NQQVATELLK SAGYEVVLAD
NGQVALDIID SRPFDAVLMD IQMPVMDGLT AARALRERYS PEELPIIAMT AHAMSGDREK
SLAAGMNAHI TKPIVLNELF ETLNHWIQHK NQHS
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