Gene Rmar_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2408 
Symbol 
ID8569073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2794043 
End bp2795986 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content69% 
IMG OID 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003291674 
Protein GI268317955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.385618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGC CGCTGGACAT CCTGCTGGTC GAGGACGACG AGGACGACTA CCACATCGTA 
CGTCGCCTGC TGAGCCGGGC TACGACCATT CAATGCACGC TGCACTGGCG GGCCAGCTAC
GAAGACGGGC TGGCGGCGCT CCGAGAGCGC CCCTTCGACG TGTGTCTGGT GGATTACCGG
CTGGGAGCGC ACGACGGGCT GTCGCTGCTC CGCACGATCC GCAGCGAAGG ACTCACCCTT
CCGGTGATTC TGCTGACCGG CCAGGGCGAC CTGCAGGTGG ACCTCGAAGC GATGGCGGCC
GGCGCCTGGG ACTACCTGAT CAAGGGACAG ATCGACGCGC AGCAACTGGA ACGCTCGATC
CGCTATGCCG TCGAGCGCCA CCGGGCCGAG GAGCGCATCC GCGAGCAGGC CGCGTTGCTG
GACGCCGCCC GGGACGTGAT CATGGCCGTC GACCTGGACG GACACGTCAT CTACTGGAAC
CGCAGCGCCG AGCAGCTTAC CGGCAAATCC GCCGCCGTGG TGCAGGGGCG GCCGGTGCCG
GAGGTATTGG ACGGCATCGA TGCCGCGCTG CTACAGGAAG CCATGCAGGC GGTGCAGACC
GACGGCGTCT GGAACGGTGA GCTGCGCGTG CACCGGCACA ACGGTGAGGA TCGCCTGCTG
GAGAGCCGAT GGACGCTGGT GCGCGACGCC TACGGCCGGC CGCGTTCGGT GCTGATCATC
GGTACCGACG TGACGGAGCG CCGCCAGCTC GAGCAGCAAT TCCTCCGGGC GCAGCGCATG
GAGAGCATCG GGCGTCTGGT CAGCGGCATG GCGCACGACC TGAACAACCT GTTCGTGCCC
ATCCTGCTGG GCGTGCGCAT GCTCGCGCAG GACACGCTCG ATCCCGAAAA GCGGGCGCGG
GCGCTGGGTA TGATCCAGCG CAGCGCCGAA CGCGGCGCCG ACCTGGTGCG CCAGGTGCTG
GCCTTCGCCC GGGGCATGGA GGGCGAGCGC GTCCCCCTCG ACGTGCGCAC GATCGTGCAG
GAAGTGGCTC ACCTGCTCCG CGAGACTTTC CCCAGCACGA TCCGCATCGA AACGCGGCTG
GACGACGCGC TCTGGCCCGT GCAGGGCGAC GCCACGCAGC TCCAGCAGGT GCTGATGAAC
CTGTGCGTCA ACGCCCGCGA CGCCATGCCC GAGGGCGGCC GGTTGCTGCT GGCCGCCGAG
AACGTCGAGG TGGACCCACA TTACGCCCGG CGCGTGCTGG AGGCGCGGCC GGGGCCGTAC
GTCTGCCTGA CGGTCAGCGA TACGGGCGTG GGCATCCCGC ACGATATTCT CGACAAGATC
TTCGAGCCGT TCTTCACGAC CAAGCCGGTT GGCAAGGGCT CCGGCCTGGG GCTGTCGACC
GTGTACAGCA TCGTGCGCAG CCACGGCGGC TTCGTCAACG TCTACAGCGA GCCGGGCCGA
GGCTCGACGT TCCGGGTGTA CCTGCCGGCC GCGCCCGAGG CCCGCGCGGC GGAGGCCGAG
GTCGCGGTGC CGACCTACCG GGGGGCCGGC GAGGGGGTGC TGCTCGTCGA CGACGAGCCG
TTCGTGCTGG AGGCCGCCCG CGAGGCGCTG GAGCAGCTGG GGTACCGCGT TTACACGGCC
ACGCAGGGTC GGGAGGCGCT CGAACAACTG GAAGCGCACG CTTCGGAGAT CCGCGCGGTC
ATCACCGACC TGGTGATGCC CGAGATGGAC GGGCTGACTT TGATCCGGGC GATCCGGGAG
CGCCGGCCGG ACGTGCCCGT CGTGGCTTCC AGCGGACTGC ACGGCGGCCG GGCCGAGGCG
GCCCGGCAGG CCGGTGCTCA TGCCTTTCTG CACAAGCCCT ACACGGCCGA AAAACTGGCG
GCCGTGTTGC ACCAGGTGCT GCACGGAACC CGGGGCCTGA AAAAAGAACG GCCTGCTCCG
GAGAGCAGGC CGTCGTGGCC ATGA
 
Protein sequence
MATPLDILLV EDDEDDYHIV RRLLSRATTI QCTLHWRASY EDGLAALRER PFDVCLVDYR 
LGAHDGLSLL RTIRSEGLTL PVILLTGQGD LQVDLEAMAA GAWDYLIKGQ IDAQQLERSI
RYAVERHRAE ERIREQAALL DAARDVIMAV DLDGHVIYWN RSAEQLTGKS AAVVQGRPVP
EVLDGIDAAL LQEAMQAVQT DGVWNGELRV HRHNGEDRLL ESRWTLVRDA YGRPRSVLII
GTDVTERRQL EQQFLRAQRM ESIGRLVSGM AHDLNNLFVP ILLGVRMLAQ DTLDPEKRAR
ALGMIQRSAE RGADLVRQVL AFARGMEGER VPLDVRTIVQ EVAHLLRETF PSTIRIETRL
DDALWPVQGD ATQLQQVLMN LCVNARDAMP EGGRLLLAAE NVEVDPHYAR RVLEARPGPY
VCLTVSDTGV GIPHDILDKI FEPFFTTKPV GKGSGLGLST VYSIVRSHGG FVNVYSEPGR
GSTFRVYLPA APEARAAEAE VAVPTYRGAG EGVLLVDDEP FVLEAAREAL EQLGYRVYTA
TQGREALEQL EAHASEIRAV ITDLVMPEMD GLTLIRAIRE RRPDVPVVAS SGLHGGRAEA
ARQAGAHAFL HKPYTAEKLA AVLHQVLHGT RGLKKERPAP ESRPSWP