Gene Rmar_2408 details

Gene Information

• Locus tag: Rmar_2408
• ID: 8569073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2794043
• End bp: 2795986
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 69%
• Product: PAS/PAC sensor hybrid histidine kinase
• Protein accession: YP_003291674
• Protein GI: 268317955

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.385618
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGACGC CGCTGGACAT CCTGCTGGTC GAGGACGACG AGGACGACTA CCACATCGTA 
CGTCGCCTGC TGAGCCGGGC TACGACCATT CAATGCACGC TGCACTGGCG GGCCAGCTAC 
GAAGACGGGC TGGCGGCGCT CCGAGAGCGC CCCTTCGACG TGTGTCTGGT GGATTACCGG 
CTGGGAGCGC ACGACGGGCT GTCGCTGCTC CGCACGATCC GCAGCGAAGG ACTCACCCTT 
CCGGTGATTC TGCTGACCGG CCAGGGCGAC CTGCAGGTGG ACCTCGAAGC GATGGCGGCC 
GGCGCCTGGG ACTACCTGAT CAAGGGACAG ATCGACGCGC AGCAACTGGA ACGCTCGATC 
CGCTATGCCG TCGAGCGCCA CCGGGCCGAG GAGCGCATCC GCGAGCAGGC CGCGTTGCTG 
GACGCCGCCC GGGACGTGAT CATGGCCGTC GACCTGGACG GACACGTCAT CTACTGGAAC 
CGCAGCGCCG AGCAGCTTAC CGGCAAATCC GCCGCCGTGG TGCAGGGGCG GCCGGTGCCG 
GAGGTATTGG ACGGCATCGA TGCCGCGCTG CTACAGGAAG CCATGCAGGC GGTGCAGACC 
GACGGCGTCT GGAACGGTGA GCTGCGCGTG CACCGGCACA ACGGTGAGGA TCGCCTGCTG 
GAGAGCCGAT GGACGCTGGT GCGCGACGCC TACGGCCGGC CGCGTTCGGT GCTGATCATC 
GGTACCGACG TGACGGAGCG CCGCCAGCTC GAGCAGCAAT TCCTCCGGGC GCAGCGCATG 
GAGAGCATCG GGCGTCTGGT CAGCGGCATG GCGCACGACC TGAACAACCT GTTCGTGCCC 
ATCCTGCTGG GCGTGCGCAT GCTCGCGCAG GACACGCTCG ATCCCGAAAA GCGGGCGCGG 
GCGCTGGGTA TGATCCAGCG CAGCGCCGAA CGCGGCGCCG ACCTGGTGCG CCAGGTGCTG 
GCCTTCGCCC GGGGCATGGA GGGCGAGCGC GTCCCCCTCG ACGTGCGCAC GATCGTGCAG 
GAAGTGGCTC ACCTGCTCCG CGAGACTTTC CCCAGCACGA TCCGCATCGA AACGCGGCTG 
GACGACGCGC TCTGGCCCGT GCAGGGCGAC GCCACGCAGC TCCAGCAGGT GCTGATGAAC 
CTGTGCGTCA ACGCCCGCGA CGCCATGCCC GAGGGCGGCC GGTTGCTGCT GGCCGCCGAG 
AACGTCGAGG TGGACCCACA TTACGCCCGG CGCGTGCTGG AGGCGCGGCC GGGGCCGTAC 
GTCTGCCTGA CGGTCAGCGA TACGGGCGTG GGCATCCCGC ACGATATTCT CGACAAGATC 
TTCGAGCCGT TCTTCACGAC CAAGCCGGTT GGCAAGGGCT CCGGCCTGGG GCTGTCGACC 
GTGTACAGCA TCGTGCGCAG CCACGGCGGC TTCGTCAACG TCTACAGCGA GCCGGGCCGA 
GGCTCGACGT TCCGGGTGTA CCTGCCGGCC GCGCCCGAGG CCCGCGCGGC GGAGGCCGAG 
GTCGCGGTGC CGACCTACCG GGGGGCCGGC GAGGGGGTGC TGCTCGTCGA CGACGAGCCG 
TTCGTGCTGG AGGCCGCCCG CGAGGCGCTG GAGCAGCTGG GGTACCGCGT TTACACGGCC 
ACGCAGGGTC GGGAGGCGCT CGAACAACTG GAAGCGCACG CTTCGGAGAT CCGCGCGGTC 
ATCACCGACC TGGTGATGCC CGAGATGGAC GGGCTGACTT TGATCCGGGC GATCCGGGAG 
CGCCGGCCGG ACGTGCCCGT CGTGGCTTCC AGCGGACTGC ACGGCGGCCG GGCCGAGGCG 
GCCCGGCAGG CCGGTGCTCA TGCCTTTCTG CACAAGCCCT ACACGGCCGA AAAACTGGCG 
GCCGTGTTGC ACCAGGTGCT GCACGGAACC CGGGGCCTGA AAAAAGAACG GCCTGCTCCG 
GAGAGCAGGC CGTCGTGGCC ATGA 

 

Protein sequence

MATPLDILLV EDDEDDYHIV RRLLSRATTI QCTLHWRASY EDGLAALRER PFDVCLVDYR 
LGAHDGLSLL RTIRSEGLTL PVILLTGQGD LQVDLEAMAA GAWDYLIKGQ IDAQQLERSI 
RYAVERHRAE ERIREQAALL DAARDVIMAV DLDGHVIYWN RSAEQLTGKS AAVVQGRPVP 
EVLDGIDAAL LQEAMQAVQT DGVWNGELRV HRHNGEDRLL ESRWTLVRDA YGRPRSVLII 
GTDVTERRQL EQQFLRAQRM ESIGRLVSGM AHDLNNLFVP ILLGVRMLAQ DTLDPEKRAR 
ALGMIQRSAE RGADLVRQVL AFARGMEGER VPLDVRTIVQ EVAHLLRETF PSTIRIETRL 
DDALWPVQGD ATQLQQVLMN LCVNARDAMP EGGRLLLAAE NVEVDPHYAR RVLEARPGPY 
VCLTVSDTGV GIPHDILDKI FEPFFTTKPV GKGSGLGLST VYSIVRSHGG FVNVYSEPGR 
GSTFRVYLPA APEARAAEAE VAVPTYRGAG EGVLLVDDEP FVLEAAREAL EQLGYRVYTA 
TQGREALEQL EAHASEIRAV ITDLVMPEMD GLTLIRAIRE RRPDVPVVAS SGLHGGRAEA 
ARQAGAHAFL HKPYTAEKLA AVLHQVLHGT RGLKKERPAP ESRPSWP