| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1367 |
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| Symbol | |
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| ID | 7084488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1518853 |
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| End bp | 1521570 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643698384 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002355022 |
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| Protein GI | 217969788 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0722784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCACG CGCTGATCGT CGACGACCGC AGCGACAACC GCTACCTGCT GCGCGCCCTG
CTGCAGGGGC ACGGATTCGC GGTCAGCGAG GCGGAGAACG GCAGCGCAGC GCTCGCACGG
GCCCGGACGC AGCGGCCCGA CGTGATCGTC AGCGACCTGC TGATGCCGGT CATGGACGGC
TACACCTTGC TGCGCGAATG GAAGGCGGAC CCCGGGCTCG CATCGATCCC GTTCATCGTC
TATACGGCCA CCTACACCGA GCCGCGCGAC GAGAAGCTCG CCCTCGACCT CGGCGCCGAC
GCCTTCATCG TCAAGCCCGC CGAGCCGGAG GCCTTCATGG AGGTCGTCGC GAACGCCCTC
GCGCGCGCGG ACGAAGGCGG CCGGGTCGCC GCCAGTCCAC GCGCCGACGA GACGGTCGTG
CTGCGGGAGT ACAACGAGGT GCTCGTCGCC AAGCTCGAAC AGCGCAGCGC CGAACTCGAG
GTCCACGTCG CCGAGCTCCA GCGCGCCGAG AGCCGCCTCG GCCGCCTGAA CCGACTCTAC
GCCGCGCTCA GCGAAACCAA CCACGCCATC GTCCATGCCA CCGCGGCACC CGCGCTGCTG
GCGACCGCGT GCCGCATCGC CATCGAGCGC GGGGGCCTGT CGGCGGCATG GATCGGCCTG
CTCAATACCG CGGGCGACGG GATCCGCGCG GCCGCCCATC ACGGCAGCCA CCTGCCCTGG
GTCGAACGCC TCGCCCTGCT GAGCCCGCAC GCCACGGCCC GCACGCCGGT CGAGATCGCG
GTCGCCCGCG GCACGACCTA CCTGCAAAAC TCGCTGCAGG ACGACCCGGC GCTCGCCCCC
ATCCATGACG AACTGGAAGC GGCCGGCCTG CGTGCGGCGA TCGCGATACC ACTGGTGCAG
GACGGGCGGA TGAGCGGCTG CTTCGTGCTG TACGCAGGCG AAAGGGGATT CTTCGACGAG
GAAATGACCG GACTCATTAC CGAGATGGCC GAAGACGTCG CATTCGCTCT GGCCAATTTC
GAGCGTGAGG CACGCCGTCA GCGCGCGGAG GAAGCCGCCC GTCTGCTTGG TCGGGCCGTC
GAGGCGTCCG CCAACGGCAT CATGATCACC GATGCGCGCC AGCCGGGAAA CCCGCTCATC
CACGTCAACA AGGCTTTCGA GCGGATCACC GGATACAGCG CTGCCGAGGC ACTCGGACGA
AATCCCGGCT TCCTGGTCGG CGCCGACCCC CTGCAGCGCG GCCTCGCGGA GGTCCGCGCT
GCAGTGAAGG CGCAGCGCGA GGCGGAGGTC GTGTTGCGTA GCCACCGCAA GGACGGCAGC
CCGTTCTGGA ACGAGCTGAG CCTCGCACCG GTGCGCGACT CGGCGGGAAC GGTGACGCAC
TTCGTCGGCG TCATCAACGA CATCAGCGAG CGCATCGCTT ACGAGGAAGC CCTCGAGCGC
CAGAACAACG AGGACCCGGT CACCGGCCTG GCGAATCGCA ACCTGCTGCG CGACCGCGTC
GGCCAGGCCA TCGCCTTCGC GCGCCAGGAC GGTCGAGCGC TCGTCCTGCT GTTGCTCGAT
CTGGACAATT TCAAGCGCAT CAACGACAGC CTCGGCCACG ACGCCGGCGA TCAGGCCCTG
AAGGAGATCG CCGGCCGCAT TCGGGACTGC GTGGATGCCT GCGACACCGT GGCGCGCATC
GGCGGCGACG AATTCGTCGT CCTGCTCACC GACCTTGCCG GCGCACAGGC CGCATCGCTG
GTCGCAGGCC GGATCCTGCG CGCGATCGGC CAGCCTCTCA TCGTGCTCGG GAGGGAAATC
AAGATCTCGG CGAGTATCGG GGCGAGCGTG TTTCCCGACG ACGACGACGG CTTCGAAGCC
CTGCTGCGCA ACGCCGACGC CGCGATGTAC CGTGCCAAGG ACGCCGGCCG CAACGCATTC
CACTTCTACA CCGCCGACAT GAATGCCGAA GCGGTCCGCA AGCTCGAGAT GGAGGGCCGG
CTGCGCCAGG CGATCGCCCA GGACGGGTTC GTTCTCCACT ACCAGCCGGT ACATGAGGCC
GCCGGCGCTC GCATGGTCGC CGCCGAGGCG CTGGTGCGCA TGCGCGACGA GAACGGCACG
ATCACGCCGC CGGGCGAGTT CATCCCCCTC GCAGAAGAGA CCGGGATGAT CCTCGCGCTG
GGCCGCTGGG TCTTGCTCGC AGCCTGCCGC GAGGCACGCC GCTGGCTCGA CCTGGGCCGC
GAGATGCAGG TGGCCGTCAA CCTCTCGGCA CGCCAGTTCA ACGATGAGGG ACTCGCCGCG
CATATCCGCC ATTGCCTGGC CGCAGCGGGC CTGCCCGCGC GCCTCCTCAA GCTCGAGATC
ACCGAGAGCA TGGTCATGCG CGACGTCGGT CAGGCCGCCC GGGTCCTGTC CACCCTTAAG
GCCCTCGACG TCAGCGTGTC GGTCGACGAT TTCGGGACCG GCCACTCCTC GCTCGCCTGC
CTTCGCCGCT TTCCGCTCGA CCAGCTCAAG ATCGACCGCA GCTTCGTGCA AGACGCGGCA
CAGGACGAGG ATAGTGCCGC CATCGTACGC GGCATCATCG CGCTCGCCGG CAGCCTGCGT
TTGCAGACCG TCGCCGAGGG GGTGGAGACC GCCGAGCAGG TGGGTTTCCT GCGGTCCGCC
GGCTGCGACC TGTTGCAGGG CTACTACTTC AGCCGCCCGC TGGAAGCAGA CACGCTGGCG
CGCCGGCTCG CGGGTTGA
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| Protein sequence | MRHALIVDDR SDNRYLLRAL LQGHGFAVSE AENGSAALAR ARTQRPDVIV SDLLMPVMDG
YTLLREWKAD PGLASIPFIV YTATYTEPRD EKLALDLGAD AFIVKPAEPE AFMEVVANAL
ARADEGGRVA ASPRADETVV LREYNEVLVA KLEQRSAELE VHVAELQRAE SRLGRLNRLY
AALSETNHAI VHATAAPALL ATACRIAIER GGLSAAWIGL LNTAGDGIRA AAHHGSHLPW
VERLALLSPH ATARTPVEIA VARGTTYLQN SLQDDPALAP IHDELEAAGL RAAIAIPLVQ
DGRMSGCFVL YAGERGFFDE EMTGLITEMA EDVAFALANF EREARRQRAE EAARLLGRAV
EASANGIMIT DARQPGNPLI HVNKAFERIT GYSAAEALGR NPGFLVGADP LQRGLAEVRA
AVKAQREAEV VLRSHRKDGS PFWNELSLAP VRDSAGTVTH FVGVINDISE RIAYEEALER
QNNEDPVTGL ANRNLLRDRV GQAIAFARQD GRALVLLLLD LDNFKRINDS LGHDAGDQAL
KEIAGRIRDC VDACDTVARI GGDEFVVLLT DLAGAQAASL VAGRILRAIG QPLIVLGREI
KISASIGASV FPDDDDGFEA LLRNADAAMY RAKDAGRNAF HFYTADMNAE AVRKLEMEGR
LRQAIAQDGF VLHYQPVHEA AGARMVAAEA LVRMRDENGT ITPPGEFIPL AEETGMILAL
GRWVLLAACR EARRWLDLGR EMQVAVNLSA RQFNDEGLAA HIRHCLAAAG LPARLLKLEI
TESMVMRDVG QAARVLSTLK ALDVSVSVDD FGTGHSSLAC LRRFPLDQLK IDRSFVQDAA
QDEDSAAIVR GIIALAGSLR LQTVAEGVET AEQVGFLRSA GCDLLQGYYF SRPLEADTLA
RRLAG
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