| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5261 |
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| Symbol | |
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| ID | 6412962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5674963 |
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| End bp | 5675676 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715151 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001994223 |
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| Protein GI | 192293618 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.909356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCGC GCATTCTGGT AGTTGAAGAC GAGGAAGCGC TGACGACGCT GCTGCGATAC
AATCTGGAAT CCGAGGGCTA CGAGGTCGAG ACGGTGGCCC GCGGCGACGA TGCCGACACC
CGGATGAAAG AGCGCATTCC CGATCTGGTG GTGTTGGACT GGATGTTGCC GGGCCTGTCC
GGCATCGAGC TGTGCCGCCG GCTGCGGGCG CGGCCGGAAA CCAAGCAACT GCCGATCATC
ATGCTGACGG CGCGCGGCGA AGAGAGCGAA CGCGTTCGCG GCCTCGCGAC CGGGGCCGAC
GATTACATCG TCAAGCCGTT CTCGGTGCCG GAGCTGCTGG CGCGGGTGAA GGGCCTGCTC
CGCCGCGCGG CGCCGGAGCG GCTCGCCACC GTGCTGGCCT ATGGCGATCT CGAACTCGAT
CGCGACAAGC GCCGGGTGGC GCGCTCCGGC CGGCCGATCG ATCTCGGCCC GACCGAGTAT
CGCTTGCTCG AGTTTTTCCT GGAGCATCCG GGCCGGGTGT TCAGCCGCGA ACAGTTGCTC
GACGGCGTCT GGGGCCGCGA CATCTATATC GATGAGCGGA CCGTCGACGT GCACATCGGG
CGTCTGCGCA AGCTGCTCAA TATCGGCCGC GAGCAGGATC CGATCCGCAC CGTCCGCGGT
GCCGGCTACG CCCTCGACGA CCGCTTTGCC AAGGTTGAAG GCAGCCCGTC GTAG
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| Protein sequence | MAARILVVED EEALTTLLRY NLESEGYEVE TVARGDDADT RMKERIPDLV VLDWMLPGLS
GIELCRRLRA RPETKQLPII MLTARGEESE RVRGLATGAD DYIVKPFSVP ELLARVKGLL
RRAAPERLAT VLAYGDLELD RDKRRVARSG RPIDLGPTEY RLLEFFLEHP GRVFSREQLL
DGVWGRDIYI DERTVDVHIG RLRKLLNIGR EQDPIRTVRG AGYALDDRFA KVEGSPS
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