More than 300 homologs were found in PanDaTox collection
for query gene Bphy_4785 on replicon NC_010623
Organism: Burkholderia phymatum STM815



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010623  Bphy_4785  response regulator receiver protein  100 
 
 		 118 aa  238  2e-62  Burkholderia phymatum STM815  Bacteria  normal  0.526141  normal  0.692787 
 
 
-
 
NC_010676  Bphyt_5913  response regulator receiver protein  47.86 
 
 		 163 aa  92.4  2e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_1937  response regulator receiver protein  42.24 
 
 		 117 aa  90.5  8e-18  Pseudomonas putida F1  Bacteria  normal  0.29733  normal  1 
 
 
-
 
NC_002947  PP_3833  response regulator receiver protein  42.24 
 
 		 117 aa  89.7  1e-17  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_3548  response regulator receiver protein  42.24 
 
 		 117 aa  88.6  3e-17  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.0400953 
 
 
-
 
NC_010681  Bphyt_1702  response regulator receiver protein  41.74 
 
 		 145 aa  87.4  7e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_5729  response regulator receiver protein  44.86 
 
 		 145 aa  84.7  4e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  0.327194  normal  1 
 
 
-
 
NC_007413  Ava_0508  response regulator receiver domain-containing protein  36.29 
 
 		 121 aa  81.6  0.000000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.481314  normal  1 
 
 
-
 
NC_014248  Aazo_4952  response regulator receiver protein  37.1 
 
 		 121 aa  81.3  0.000000000000004  'Nostoc azollae' 0708  Bacteria  normal  0.699568  n/a   
 
 
-
 
NC_011729  PCC7424_1422  response regulator receiver sensor signal transduction histidine kinase  41.88 
 
 		 361 aa  81.3  0.000000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_010623  Bphy_5333  response regulator receiver protein  41.07 
 
 		 143 aa  81.3  0.000000000000005  Burkholderia phymatum STM815  Bacteria  normal  1  hitchhiker  0.00741139 
 
 
-
 
NC_013161  Cyan8802_0751  response regulator receiver protein  38.84 
 
 		 121 aa  80.5  0.000000000000006  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_1331  multi-sensor signal transduction histidine kinase  49.38 
 
 		 576 aa  80.5  0.000000000000006  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_0722  response regulator receiver protein  38.84 
 
 		 121 aa  80.5  0.000000000000006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010623  Bphy_4784  response regulator receiver protein  39.13 
 
 		 131 aa  80.1  0.000000000000008  Burkholderia phymatum STM815  Bacteria  normal  0.724017  normal  0.683358 
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  39.51 
 
 		 231 aa  80.1  0.000000000000009  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  37.82 
 
 		 369 aa  79.7  0.00000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_007948  Bpro_4150  response regulator receiver protein  34.48 
 
 		 125 aa  79.7  0.00000000000001  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.583085 
 
 
-
 
NC_007413  Ava_1498  two component transcriptional regulator  40.34 
 
 		 247 aa  79.3  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.220919  normal  1 
 
 
-
 
NC_010501  PputW619_3202  response regulator receiver protein  38.79 
 
 		 117 aa  79  0.00000000000002  Pseudomonas putida W619  Bacteria  normal  0.529191  normal  1 
 
 
-
 
NC_011729  PCC7424_3637  two component transcriptional regulator, winged helix family  40.34 
 
 		 246 aa  79.3  0.00000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  43.37 
 
 		 226 aa  78.6  0.00000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_5207  winged helix family two component transcriptional regulator  39.67 
 
 		 247 aa  78.6  0.00000000000003  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2810  response regulator receiver protein  36.07 
 
 		 127 aa  77.8  0.00000000000005  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0130618  n/a   
 
 
-
 
NC_007604  Synpcc7942_0095  two component transcriptional regulator  40.34 
 
 		 249 aa  77.8  0.00000000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_2064  response regulator receiver protein  38.98 
 
 		 128 aa  77.8  0.00000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_0669  response regulator receiver protein  41.98 
 
 		 123 aa  77  0.00000000000009  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  42.17 
 
 		 230 aa  76.3  0.0000000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  42.17 
 
 		 230 aa  76.3  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_1791  two component transcriptional regulator, winged helix family  42.5 
 
 		 240 aa  76.6  0.0000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000000442123 
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  42.17 
 
 		 230 aa  76.3  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_007777  Francci3_3288  two component transcriptional regulator  38.33 
 
 		 272 aa  76.3  0.0000000000001  Frankia sp. CcI3  Bacteria  normal  1  normal  0.234797 
 
 
-
 
NC_008312  Tery_4937  two component transcriptional regulator  39.5 
 
 		 257 aa  76.3  0.0000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.565868 
 
 
-
 
NC_002939  GSU2219  response regulator  36.28 
 
 		 123 aa  76.3  0.0000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  33.91 
 
 		 278 aa  75.9  0.0000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_3968  response regulator receiver protein  36.29 
 
 		 125 aa  75.5  0.0000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_013131  Caci_0904  two component transcriptional regulator, winged helix family  41.38 
 
 		 254 aa  75.9  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.936287  normal  0.32173 
 
 
-
 
NC_010524  Lcho_0237  response regulator receiver protein  43.21 
 
 		 124 aa  75.9  0.0000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000555979 
 
 
-
 
NC_011729  PCC7424_3000  response regulator receiver protein  34.71 
 
 		 124 aa  75.1  0.0000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011884  Cyan7425_3742  two component transcriptional regulator, winged helix family  40.17 
 
 		 263 aa  75.1  0.0000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_1936  two component transcriptional regulator, winged helix family  39.5 
 
 		 246 aa  75.1  0.0000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010508  Bcenmc03_1106  response regulator receiver protein  43.14 
 
 		 119 aa  75.1  0.0000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1347  two component transcriptional regulator  45.68 
 
 		 228 aa  75.1  0.0000000000003  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_2427  response regulator receiver protein  36.67 
 
 		 159 aa  75.1  0.0000000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.468058 
 
 
-
 
NC_008688  Pden_5113  response regulator receiver protein  38.46 
 
 		 121 aa  75.1  0.0000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1748  response regulator receiver  42.17 
 
 		 123 aa  75.5  0.0000000000003  Nocardioides sp. JS614  Bacteria  normal  0.122601  n/a   
 
 
-
 
NC_008705  Mkms_1365  two component transcriptional regulator  45.68 
 
 		 228 aa  75.1  0.0000000000003  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_1963  two component transcriptional regulator, winged helix family  39.5 
 
 		 246 aa  75.1  0.0000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.470012 
 
 
-
 
NC_009077  Mjls_1381  two component transcriptional regulator  45.68 
 
 		 228 aa  75.1  0.0000000000003  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.497022 
 
 
-
 
NC_009428  Rsph17025_1472  response regulator receiver protein  38.46 
 
 		 122 aa  74.7  0.0000000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.413604  normal  1 
 
 
-
 
NC_007952  Bxe_B0483  response regulator receiver domain-containing protein  37.93 
 
 		 116 aa  74.7  0.0000000000004  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0669  putative twitching motility two-component response regulator transcription regulator protein  34.15 
 
 		 122 aa  74.3  0.0000000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  43.37 
 
 		 236 aa  74.3  0.0000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal  1 
 
 
-
 
NC_011891  A2cp1_3985  response regulator receiver protein  38.14 
 
 		 125 aa  74.3  0.0000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1220  response regulator receiver protein  44.05 
 
 		 130 aa  74.3  0.0000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_4712  two component transcriptional regulator  45.68 
 
 		 228 aa  73.9  0.0000000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.541483  normal  0.0134498 
 
 
-
 
NC_011004  Rpal_0146  response regulator receiver protein  37.1 
 
 		 121 aa  73.9  0.0000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0075  response regulator receiver modulated PilZ sensor protein  36.44 
 
 		 227 aa  73.9  0.0000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  0.124346  n/a   
 
 
-
 
NC_008312  Tery_3248  response regulator receiver protein  33.88 
 
 		 121 aa  73.9  0.0000000000007  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.500247 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  40.74 
 
 		 239 aa  73.9  0.0000000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_008726  Mvan_1752  two component transcriptional regulator  45.68 
 
 		 228 aa  73.9  0.0000000000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.581522 
 
 
-
 
NC_013739  Cwoe_5515  response regulator receiver protein  41.51 
 
 		 134 aa  73.6  0.0000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_6738  response regulator receiver, CheY1  38.89 
 
 		 121 aa  73.9  0.0000000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.079904  normal  1 
 
 
-
 
NC_011884  Cyan7425_3747  response regulator receiver protein  32.26 
 
 		 121 aa  73.6  0.0000000000009  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_1501  response regulator receiver protein  36.21 
 
 		 132 aa  73.6  0.0000000000009  Rhodothermus marinus DSM 4252  Bacteria  normal  0.153095  n/a   
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  38.26 
 
 		 222 aa  73.6  0.000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  34.51 
 
 		 353 aa  73.2  0.000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_007516  Syncc9605_2378  two component transcriptional regulator  38.79 
 
 		 262 aa  73.2  0.000000000001  Synechococcus sp. CC9605  Bacteria  normal  1  normal  0.936352 
 
 
-
 
NC_011729  PCC7424_2795  response regulator receiver protein  39.76 
 
 		 121 aa  72.8  0.000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007796  Mhun_0986  response regulator receiver sensor signal transduction histidine kinase  40.24 
 
 		 433 aa  72.8  0.000000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.0645349  normal  0.624976 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  43.04 
 
 		 312 aa  73.2  0.000000000001  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  38.14 
 
 		 227 aa  73.2  0.000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_008740  Maqu_0247  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  41.18 
 
 		 890 aa  73.2  0.000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  40.96 
 
 		 231 aa  73.2  0.000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.777838 
 
 
-
 
NC_009675  Anae109_0930  response regulator receiver protein  40.35 
 
 		 456 aa  73.2  0.000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.139996  normal  0.100238 
 
 
-
 
NC_011726  PCC8801_1812  two component transcriptional regulator, LuxR family  36.75 
 
 		 231 aa  72.8  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0173  response regulator receiver protein  33.91 
 
 		 119 aa  72.4  0.000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_0059  response regulator receiver domain-containing protein  32.5 
 
 		 125 aa  72.8  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.157498  normal  0.212271 
 
 
-
 
NC_009485  BBta_2142  chemotaxis protein cheY  36.13 
 
 		 121 aa  72  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_0922  response regulator receiver protein  39.45 
 
 		 459 aa  72.8  0.000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  42.17 
 
 		 226 aa  72.4  0.000000000002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.575064 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  39.51 
 
 		 229 aa  72.8  0.000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_009457  VC0395_A0150  sensory box sensor histidine kinase/response regulator  43.75 
 
 		 1177 aa  72.4  0.000000000002  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0932  response regulator receiver sensor signal transduction histidine kinase  37.61 
 
 		 374 aa  72.8  0.000000000002  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2989  response regulator receiver protein  40.35 
 
 		 119 aa  72.4  0.000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013161  Cyan8802_1838  two component transcriptional regulator, LuxR family  36.75 
 
 		 231 aa  72.8  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_0873  response regulator receiver domain-containing protein  39.45 
 
 		 483 aa  72.4  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0633299  n/a   
 
 
-
 
NC_011145  AnaeK_0918  response regulator receiver protein  39.45 
 
 		 458 aa  72  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  40.24 
 
 		 372 aa  72.4  0.000000000002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_2695  response regulator receiver domain-containing protein  37.93 
 
 		 186 aa  72.4  0.000000000002  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.00269866  normal  0.78823 
 
 
-
 
NC_007908  Rfer_3778  response regulator receiver domain-containing protein  37.07 
 
 		 124 aa  72.4  0.000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  40.74 
 
 		 170 aa  72  0.000000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  37.04 
 
 		 227 aa  72.8  0.000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0239565 
 
 
-
 
NC_013501  Rmar_0776  response regulator receiver protein  50 
 
 		 121 aa  72.4  0.000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.428997  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  38.27 
 
 		 230 aa  72.4  0.000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_008820  P9303_26471  two-component response regulator  37.07 
 
 		 268 aa  72.8  0.000000000002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.889517 
 
 
-
 
NC_009675  Anae109_1850  response regulator receiver protein  42.24 
 
 		 126 aa  72  0.000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.549411  normal  1 
 
 
-
 
NC_009976  P9211_01421  two-component response regulator  37.29 
 
 		 258 aa  72  0.000000000003  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  0.341989 
 
 
-
 
NC_013235  Namu_5029  two component transcriptional regulator, winged helix family  36.36 
 
 		 225 aa  72  0.000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_1901  response regulator receiver protein  30.43 
 
 		 125 aa  71.6  0.000000000003  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
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