Gene Lcho_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0237 
Symbol 
ID6160556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp254034 
End bp254408 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content68% 
IMG OID641662981 
Productresponse regulator receiver protein 
Protein accessionYP_001789277 
Protein GI171056928 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000555979 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCACA AGATACTGAT CGCCGATGAC GAGCCCAACA TCCTGATCTC GCTCGAATAC 
CTGATGAAGC GCCAAGGCTT CGACGTCCGC CTGGCGCGCG ACGGCCAGGA GGCGCTCGAC
GCGGTCGCCG CCGACTGCCC CGACCTGCTG CTGCTCGACG TCATGATGCC GCGCAAGAGC
GGCTTCGACG TCTGCCAGGC GCTGCGTGCC GACGAGCGCT ACAACGCGCT GCGCATCCTG
ATGCTGACCG CCAAGGGCCG CGACACCGAT CTGGCCAAGG GCCTGGCGCT GGGCGCCGAC
GGCTACATGA CCAAGCCCTT CTCGACCCGC GAGCTGGTCG AGCGCGTCAA GGCGATGCTG
GAGGCGCCGC GGTGA
 
Protein sequence
MSHKILIADD EPNILISLEY LMKRQGFDVR LARDGQEALD AVAADCPDLL LLDVMMPRKS 
GFDVCQALRA DERYNALRIL MLTAKGRDTD LAKGLALGAD GYMTKPFSTR ELVERVKAML
EAPR