Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0237 |
Symbol | |
ID | 6160556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 254034 |
End bp | 254408 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641662981 |
Product | response regulator receiver protein |
Protein accession | YP_001789277 |
Protein GI | 171056928 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000555979 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCACA AGATACTGAT CGCCGATGAC GAGCCCAACA TCCTGATCTC GCTCGAATAC CTGATGAAGC GCCAAGGCTT CGACGTCCGC CTGGCGCGCG ACGGCCAGGA GGCGCTCGAC GCGGTCGCCG CCGACTGCCC CGACCTGCTG CTGCTCGACG TCATGATGCC GCGCAAGAGC GGCTTCGACG TCTGCCAGGC GCTGCGTGCC GACGAGCGCT ACAACGCGCT GCGCATCCTG ATGCTGACCG CCAAGGGCCG CGACACCGAT CTGGCCAAGG GCCTGGCGCT GGGCGCCGAC GGCTACATGA CCAAGCCCTT CTCGACCCGC GAGCTGGTCG AGCGCGTCAA GGCGATGCTG GAGGCGCCGC GGTGA
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Protein sequence | MSHKILIADD EPNILISLEY LMKRQGFDVR LARDGQEALD AVAADCPDLL LLDVMMPRKS GFDVCQALRA DERYNALRIL MLTAKGRDTD LAKGLALGAD GYMTKPFSTR ELVERVKAML EAPR
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