More than 300 homologs were found in PanDaTox collection
for query gene BBta_2142 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_2142  chemotaxis protein cheY  100 
 
 
121 aa  245  2e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2428  response regulator receiver domain-containing protein  62.5 
 
 
128 aa  155  2e-37  Geobacter metallireducens GS-15  Bacteria  normal  0.0310268  normal 
 
 
-
 
NC_002939  GSU1289  chemotaxis protein CheY  60.83 
 
 
121 aa  154  3e-37  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1853  response regulator receiver protein  60 
 
 
121 aa  154  4e-37  Stenotrophomonas maltophilia R551-3  Bacteria  hitchhiker  0.00571982  normal  0.853875 
 
 
-
 
NC_010814  Glov_1739  response regulator receiver protein  60.83 
 
 
121 aa  153  8e-37  Geobacter lovleyi SZ  Bacteria  normal  0.0375564  n/a   
 
 
-
 
NC_008609  Ppro_1606  response regulator receiver protein  59.17 
 
 
121 aa  152  1e-36  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0187  response regulator receiver protein  60.17 
 
 
120 aa  152  2e-36  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0167  response regulator receiver protein  61.54 
 
 
120 aa  152  2e-36  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3494  response regulator receiver protein  60.68 
 
 
120 aa  152  2e-36  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.313433 
 
 
-
 
NC_009092  Shew_0114  response regulator receiver protein  59.83 
 
 
120 aa  149  8.999999999999999e-36  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1447  response regulator receiver protein  58.33 
 
 
121 aa  148  3e-35  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010717  PXO_00031  chemotaxis response regulator  60.87 
 
 
116 aa  148  3e-35  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371607  n/a   
 
 
-
 
NC_011146  Gbem_1593  response regulator receiver protein  58.82 
 
 
121 aa  146  8e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0468  response regulator receiver protein  55 
 
 
120 aa  146  8e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.156981 
 
 
-
 
NC_012918  GM21_2620  response regulator receiver protein  58.82 
 
 
121 aa  146  8e-35  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_1541  response regulator receiver protein  55.83 
 
 
120 aa  146  9e-35  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0754  response regulator receiver domain-containing protein  59.83 
 
 
120 aa  146  9e-35  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2994  response regulator receiver protein  58.82 
 
 
121 aa  145  1.0000000000000001e-34  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1417  response regulator receiver protein  59.66 
 
 
120 aa  145  1.0000000000000001e-34  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.212789  n/a   
 
 
-
 
NC_008789  Hhal_2168  response regulator receiver protein  58.12 
 
 
120 aa  145  2.0000000000000003e-34  Halorhodospira halophila SL1  Bacteria  normal  0.747517  n/a   
 
 
-
 
NC_008576  Mmc1_0631  response regulator receiver protein  57.5 
 
 
121 aa  145  2.0000000000000003e-34  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3108  response regulator receiver domain-containing protein  61.86 
 
 
120 aa  144  5e-34  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0278  response regulator receiver protein  53.33 
 
 
121 aa  142  1e-33  Caulobacter sp. K31  Bacteria  normal  0.143889  normal  0.948049 
 
 
-
 
NC_007519  Dde_2107  response regulator receiver domain-containing protein  57.5 
 
 
120 aa  142  2e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_02260  putative two-component response regulator  55.37 
 
 
121 aa  140  6e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.797803  normal 
 
 
-
 
NC_009656  PSPA7_0259  putative two-component response regulator  55.37 
 
 
121 aa  140  8e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  0.40567  n/a   
 
 
-
 
NC_010581  Bind_3622  response regulator receiver protein  55 
 
 
121 aa  139  1.9999999999999998e-32  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  decreased coverage  0.00707081 
 
 
-
 
NC_009439  Pmen_1570  response regulator receiver protein  55 
 
 
121 aa  139  1.9999999999999998e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.945276 
 
 
-
 
NC_007005  Psyr_0788  response regulator receiver  53.78 
 
 
122 aa  138  3e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0725  response regulator receiver  56.67 
 
 
121 aa  138  3e-32  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.537285 
 
 
-
 
NC_007947  Mfla_1937  response regulator receiver domain-containing protein  58.33 
 
 
121 aa  138  3e-32  Methylobacillus flagellatus KT  Bacteria  normal  0.644536  normal 
 
 
-
 
NC_009456  VC0395_0147  chemotaxis protein CheY  53.85 
 
 
119 aa  137  4.999999999999999e-32  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0880  response regulator receiver protein  52.89 
 
 
123 aa  137  4.999999999999999e-32  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2650  response regulator receiver protein  56.3 
 
 
120 aa  137  4.999999999999999e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0915  chemotaxis protein CheY  52.94 
 
 
122 aa  137  6e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3298  response regulator receiver protein  54.62 
 
 
121 aa  137  6e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0092  response regulator receiver protein  59.5 
 
 
122 aa  136  1e-31  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2097  response regulator receiver protein  55.46 
 
 
121 aa  135  2e-31  Shewanella baltica OS223  Bacteria  normal  0.371893  normal 
 
 
-
 
NC_009665  Shew185_2248  response regulator receiver protein  55.46 
 
 
121 aa  135  2e-31  Shewanella baltica OS185  Bacteria  normal  0.426629  n/a   
 
 
-
 
NC_009997  Sbal195_2365  response regulator receiver protein  55.46 
 
 
121 aa  135  2e-31  Shewanella baltica OS195  Bacteria  decreased coverage  0.00457125  normal 
 
 
-
 
NC_010524  Lcho_1598  response regulator receiver protein  56.03 
 
 
120 aa  134  4e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00129925 
 
 
-
 
NC_009052  Sbal_2111  Fis family transcriptional regulator  54.62 
 
 
121 aa  134  4e-31  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4079  chemotaxis receiver protein  52.1 
 
 
121 aa  133  6.0000000000000005e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0297  response regulator receiver protein  50.83 
 
 
121 aa  134  6.0000000000000005e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.127858  normal  0.448356 
 
 
-
 
NC_008825  Mpe_A0584  chemotaxis signal transduction protein CheY  55.17 
 
 
120 aa  133  7.000000000000001e-31  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0329  response regulator receiver protein  50.83 
 
 
121 aa  133  7.000000000000001e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.629137 
 
 
-
 
NC_009636  Smed_0234  response regulator receiver protein  51.67 
 
 
121 aa  132  1.9999999999999998e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.695764  normal  0.176079 
 
 
-
 
NC_007908  Rfer_0899  response regulator receiver domain-containing protein  50.83 
 
 
122 aa  131  3e-30  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3294  response regulator receiver  51.26 
 
 
120 aa  130  5e-30  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1880  response regulator receiver protein  52.94 
 
 
121 aa  130  5e-30  Shewanella sp. MR-7  Bacteria  normal  normal  0.578036 
 
 
-
 
NC_008321  Shewmr4_2094  response regulator receiver protein  52.94 
 
 
121 aa  130  6.999999999999999e-30  Shewanella sp. MR-4  Bacteria  normal  normal  0.911812 
 
 
-
 
NC_007760  Adeh_1378  response regulator receiver domain-containing protein  50.42 
 
 
122 aa  130  9e-30  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.207936  n/a   
 
 
-
 
NC_008577  Shewana3_2219  response regulator receiver protein  52.94 
 
 
121 aa  129  1.0000000000000001e-29  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2120  chemotaxis protein CheY  52.1 
 
 
121 aa  129  2.0000000000000002e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_0566  response regulator receiver domain-containing protein  54.31 
 
 
120 aa  129  2.0000000000000002e-29  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2479  response regulator receiver protein  49.58 
 
 
122 aa  128  3e-29  Anaeromyxobacter sp. K  Bacteria  normal  0.591075  n/a   
 
 
-
 
NC_011138  MADE_00411  chemotaxis protein CheY  50.42 
 
 
121 aa  128  3e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2575  response regulator receiver protein  49.58 
 
 
122 aa  127  4.0000000000000003e-29  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0149684  n/a   
 
 
-
 
NC_007404  Tbd_1625  response regulator receiver domain-containing protein  53.39 
 
 
120 aa  126  9.000000000000001e-29  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.608115 
 
 
-
 
NC_008786  Veis_2177  response regulator receiver protein  51.72 
 
 
120 aa  125  2.0000000000000002e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_22620  response regulator receiver protein  49.59 
 
 
124 aa  125  2.0000000000000002e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4379  response regulator receiver protein  51.69 
 
 
120 aa  125  3e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2318  chemotaxis protein CheY  48.31 
 
 
121 aa  124  3e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_1315  response regulator receiver protein  47.9 
 
 
121 aa  124  3e-28  Thauera sp. MZ1T  Bacteria  normal  0.0517324  n/a   
 
 
-
 
NC_011369  Rleg2_3265  response regulator receiver protein  51.67 
 
 
122 aa  124  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.571434  normal  0.349593 
 
 
-
 
NC_008782  Ajs_3791  response regulator receiver protein  50.85 
 
 
120 aa  124  6e-28  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3065  response regulator receiver protein  50.85 
 
 
120 aa  124  6e-28  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0654  response regulator receiver protein  52.99 
 
 
120 aa  123  9e-28  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.54464 
 
 
-
 
NC_010524  Lcho_1535  response regulator receiver protein  49.17 
 
 
121 aa  122  1e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0267991 
 
 
-
 
NC_010524  Lcho_3796  response regulator receiver protein  51.4 
 
 
109 aa  122  2e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011728  BbuZS7_0581  chemotaxis response regulator  49.6 
 
 
124 aa  122  2e-27  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1007  chemotaxis protein CheY  52.46 
 
 
126 aa  121  4e-27  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0611  response regulator receiver protein  50.86 
 
 
121 aa  120  6e-27  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3564  response regulator receiver protein  50 
 
 
122 aa  120  6e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0923704 
 
 
-
 
NC_009049  Rsph17029_1107  response regulator receiver protein  50 
 
 
122 aa  120  9e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.91502 
 
 
-
 
NC_007493  RSP_2443  putative chemotaxis response regulator, CheY5  50 
 
 
122 aa  120  9e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.451762  n/a   
 
 
-
 
NC_007643  Rru_A1398  response regulator receiver domain-containing protein  48.33 
 
 
123 aa  119  9.999999999999999e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.503734  n/a   
 
 
-
 
NC_011989  Avi_4317  chemotaxis receiver protein  47.5 
 
 
122 aa  119  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  0.257676  n/a   
 
 
-
 
NC_009429  Rsph17025_3298  hypothetical protein  46.22 
 
 
121 aa  119  1.9999999999999998e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.244169  normal  0.765394 
 
 
-
 
NC_009484  Acry_2707  response regulator receiver protein  54.17 
 
 
121 aa  119  1.9999999999999998e-26  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1095  response regulator receiver domain-containing protein  46.15 
 
 
118 aa  118  3e-26  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.344664  n/a   
 
 
-
 
NC_007494  RSP_3302  chemotaxis response regulator, CheY4  46.22 
 
 
121 aa  117  3.9999999999999996e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.930651  n/a   
 
 
-
 
NC_009050  Rsph17029_4035  response regulator receiver protein  46.22 
 
 
121 aa  117  3.9999999999999996e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.52498  normal 
 
 
-
 
NC_007650  BTH_II0155  chemotaxis response regulator  45.3 
 
 
120 aa  117  4.9999999999999996e-26  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0203  chemotaxis response regulator  45.3 
 
 
123 aa  117  7e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.989482  n/a   
 
 
-
 
NC_009428  Rsph17025_1787  response regulator receiver protein  48.33 
 
 
122 aa  116  7.999999999999999e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3680  response regulator receiver domain-containing protein  49.56 
 
 
127 aa  116  9e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.383377  normal  0.047176 
 
 
-
 
NC_010524  Lcho_1536  response regulator receiver protein  43.97 
 
 
122 aa  116  9e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0284047 
 
 
-
 
NC_007651  BTH_I3183  chemotaxis response regulator  50.44 
 
 
126 aa  116  9.999999999999999e-26  Burkholderia thailandensis E264  Bacteria  normal  0.258509  n/a   
 
 
-
 
NC_011004  Rpal_0146  response regulator receiver protein  48.7 
 
 
121 aa  116  9.999999999999999e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2842  response regulator receiver domain-containing protein  44.17 
 
 
126 aa  114  3e-25  Jannaschia sp. CCS1  Bacteria  normal  0.810937  normal  0.282987 
 
 
-
 
NC_009428  Rsph17025_0263  response regulator receiver protein  46.22 
 
 
121 aa  114  3.9999999999999997e-25  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.419062 
 
 
-
 
NC_007493  RSP_2437  chemotaxis response regulator, CheY1  45.69 
 
 
122 aa  114  5e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.365798  n/a   
 
 
-
 
NC_009049  Rsph17029_1101  response regulator receiver protein  45.69 
 
 
122 aa  113  6.9999999999999995e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.956043  normal 
 
 
-
 
NC_009485  BBta_6738  response regulator receiver, CheY1  47.41 
 
 
121 aa  112  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.079904  normal 
 
 
-
 
NC_009074  BURPS668_3856  chemotaxis protein CheY  48.67 
 
 
126 aa  112  2.0000000000000002e-24  Burkholderia pseudomallei 668  Bacteria  normal  0.119201  n/a   
 
 
-
 
NC_009080  BMA10247_3115  chemotaxis response regulator  48.67 
 
 
126 aa  112  2.0000000000000002e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2860  chemotaxis response regulator  48.67 
 
 
126 aa  112  2.0000000000000002e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3187  response regulator receiver protein  49.17 
 
 
136 aa  112  2.0000000000000002e-24  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0078  chemotaxis two-component response regulator CheY1  48.67 
 
 
126 aa  112  2.0000000000000002e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
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