Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0247 |
Symbol | |
ID | 4656870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 286990 |
End bp | 289662 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639810203 |
Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_957540 |
Protein GI | 120553189 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGGA TACTTATTGT TGATGATCAT GAACCCAACC GGGAGCTGGT TGCTTCCCTG GCGGGCTATC TGGGCCACGA GATTCTGGAA GCACCGGACG GCGAAAAAGC CCTGGCCGTC GTCCGGCGAC ACCGCCCGGA CCTGGTGATC TGCGATCTGT TGATGCCAGT GATGGATGGC TATGAATTTG TGCGTCAGGT ACGACAGGAT CCGCGCATTG CCGACACCGA AATCATGTTC TACACCGCCA ACTATCGTGA AGATGAGGCA CGCACACTGG CCAGCCAGTT GGGAGTTCAC CGAATCATCT TCAAACCCTG TGTTCCCGAG GACGTGCTCG AAGCCATAGA AAGCGCACTT CGCCCGATAG ATTCTCCGCC AGAGCCCACT CAGGCGGTGG ATGAAAACCG CTTCGACGCC GAGCATACCC GAGTCCTGAC CGACACGCTG TCCCGCAAAA GCGATGAACT GGAAAAGGCG AATCGACGGC TCGCCGCCCT CACCGAAATC AATCTTCAGC TTTCGGGAAT GCGCGATGCC GGTCGTATGC TGGAGACGAT CTGTCGCGAT GCCCGCGCCC TGGTAGGCGC CAGCTATGGC ATTCTGTGTG TCAACGAGAG CCACAACGGC GACCAGCAGA TTCGGCTTTT CCTCAGTGGC TTCAGTCCCG AACTGAAACA ACAACTCGCC TGCCCGGGAA TCAATGACGG GGTTCCCGGT GCCGTGTTGC GGGACAGACT CTCGAAAAGA CTCCATGCCG GGGGCCATCA GGCACTGAAA ATCGGTCTGC CAGAAGGCTA TCCACCCGTT CAATCCTGCG TGGTTTCGCC CATCATGTCG GCGACGGAGG TTTACGGCTG GGTCTGCCTG ATCAATCGCC TGGACGACGA GCCATTCAGT GAGGAAGACG AATGGCTCTG CAGCTCTCAC GCAGCCATGG CTGGCCGGGT TTATGAGAAC CGCAGCCTGT ATCTGCAACT GGAGAGCCGG GCCCGCAAGC TGCAACTGTA TGACCGGGCA ATCGAAGAAA GCAGCAACGG CATTGTGATC TGTCTGGCCG ATAAAACACG GGATAACCCG GTCATCTACG CCAACCGCGC CTTCAGCATC ATGACCGGTT ACAGCCACGA CGAGATCATC GGTCTGAGCC CCCGCTTCCT GCTGGCCAAC GATCTGGCCC AGCCGGGACT GGAAAGGCTG CGCAACTGCA TGCGCCATGG CGGCTCTGCC CGAGCCATCC TCAGAAACTA CCGGAAAGAC GGCAGTCTGT TCTGGAATGA AGTAGCGCTT GCCGCAGTCC ATAACGAACA CGGCGAGATT GCGCATTTCA TCAGCGTTTT CAATGATGTG ACAGATCGGA AACGGTATGA GGCGGCGCTG GAGTATCAGG CCAATCACGA TGACCTGACC GGGCTGCCAA ACCGTAACCT GCTTCGGGAC CGGCTGGAAC ATGCCATTAC CAAGGCGACA CGCGAGCACA CCAAGCTCGC CGTGCTGCTG CTGGATCTGG ACCAGTTCAA ACGCGTGAAT GACGGTCTGG GCCACAAAAT CGGCGATACC CTGATTCAAC GGGTTGCCTC CCGAATGAGT CAGTGTGTTC GTGACAGCGA CACGGTGGCC CGCCTCGGGG GCGATGAATT CATGATTCTC AGTACCGATA TCCGCGATGA GCGGGCGGCG GCCACCCTTG CGCAGAAGCT GCTTCGGCAG TTCCGACAGA AGGTAGCCAT TAACGGCCAT GAAATCATCG CCTCCGCCAG CATCGGCATC GCCATGTTTC CGAAGGATGG CGATAACGGC GATGAATTAT TCCGGAATGC CGATACCGCC ATGTACCGGG CGAAGGACGT CGGCAGAAAT GGCTTTCAGT TCTATTCTGC GGAGATGAAT AACCGCATGC GGGAGCGGCT CTATCTGGAA CAGTCGCTCC GCAATGCCAT TGGCCTGCAT CAACTGTCAC TCTGGTATCA GCCGAAACTG GATCTTGCCA GTGGCTCGGT CAAAAGCGCA GAAGCCCTGA TTCGATGGCG CCACCCCCAA TTGGGCATGA TTTCTCCCGG GGACTTTATT CCCATTGCCG AAGAAACCGG TTTAATACTG CCCATCGGCG CCTGGGTGAT TGAAGAAGCC TCTCGCCAGC TCGCCAAATG GCGTGATCAG GAGAACCAGG ACATTCGGGT TGCCATCAAC ATCTCGGCCT ATCAACTCAG TCATGGCAAA CTCACGGATC AGGTTATCCA GGCCCTGGAC AGCCTGGGAC TGGATCCGCA GTCACTGACC ATTGAGGTGA CCGAAACCGC CATCATGCCC CAGATGGACA AGGCCGTTTG CGAGCTTCAG TCACTCAGGG AAATGGGCAT TCGCGTCGCT CTCGATGATT TCGGCACCGG CTACTCAAGC CTGACTTACC TGAAACGTTT TCCGATCGAT ATCCTGAAAA TTGACCGGAG TTTCGTCTCC GACATCGCCG ATGACGAGGA AAGCGGGGCC ATCGTCAAAA CCATCATCAA CCTGGCCCAC AACCTCAACA TGACCGTGGT GGCGGAAGGT GTGGAAACAG AGGCGCAACT GGAATTTCTG AGGACAAACG GATGCGACGA GGTACAGGGT TACTATTTCT GCAAACCCCT GCCGTCGGAA GAGTGCCTCG AGTTCCTGCG CTGCCGGCGT TAG
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Protein sequence | MARILIVDDH EPNRELVASL AGYLGHEILE APDGEKALAV VRRHRPDLVI CDLLMPVMDG YEFVRQVRQD PRIADTEIMF YTANYREDEA RTLASQLGVH RIIFKPCVPE DVLEAIESAL RPIDSPPEPT QAVDENRFDA EHTRVLTDTL SRKSDELEKA NRRLAALTEI NLQLSGMRDA GRMLETICRD ARALVGASYG ILCVNESHNG DQQIRLFLSG FSPELKQQLA CPGINDGVPG AVLRDRLSKR LHAGGHQALK IGLPEGYPPV QSCVVSPIMS ATEVYGWVCL INRLDDEPFS EEDEWLCSSH AAMAGRVYEN RSLYLQLESR ARKLQLYDRA IEESSNGIVI CLADKTRDNP VIYANRAFSI MTGYSHDEII GLSPRFLLAN DLAQPGLERL RNCMRHGGSA RAILRNYRKD GSLFWNEVAL AAVHNEHGEI AHFISVFNDV TDRKRYEAAL EYQANHDDLT GLPNRNLLRD RLEHAITKAT REHTKLAVLL LDLDQFKRVN DGLGHKIGDT LIQRVASRMS QCVRDSDTVA RLGGDEFMIL STDIRDERAA ATLAQKLLRQ FRQKVAINGH EIIASASIGI AMFPKDGDNG DELFRNADTA MYRAKDVGRN GFQFYSAEMN NRMRERLYLE QSLRNAIGLH QLSLWYQPKL DLASGSVKSA EALIRWRHPQ LGMISPGDFI PIAEETGLIL PIGAWVIEEA SRQLAKWRDQ ENQDIRVAIN ISAYQLSHGK LTDQVIQALD SLGLDPQSLT IEVTETAIMP QMDKAVCELQ SLREMGIRVA LDDFGTGYSS LTYLKRFPID ILKIDRSFVS DIADDEESGA IVKTIINLAH NLNMTVVAEG VETEAQLEFL RTNGCDEVQG YYFCKPLPSE ECLEFLRCRR
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