Gene Pden_5113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5113 
Symbol 
ID4583674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp629302 
End bp629667 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content66% 
IMG OID639772416 
Productresponse regulator receiver protein 
Protein accessionYP_918869 
Protein GI119387835 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATA GGGTGCTGAT TGCGGATGAC GAGCCGAACA TCGTCGTCTC GTTGTCCTTC 
ATGCTGAAAC GCGAGGGCTA CGAGGTGCTG GTCGCCCCGG ACGGCACGCA GGCGCTGGCG
ATGATCCGCG GCGAACGGCC GCGGCTGGTG CTTCTGGATG CGGCCATGCC GGGCATGAGC
GGCTTCGAGG TCTGCGAAGC GGTGCGCGCC GATCCCGAGC TTTCCGGCAT CCGCATCCTG
ATGCTGACCG CCAAGGGCCG CGACACCGAC ATCGCCCGCG GCATGGGGGC GGGTGCCGAC
GCCTATGTGA CGAAACCTTT TTCGACCCGC GACCTGATCG TGCGCATCCG CGAGATGCTG
GCATGA
 
Protein sequence
MTDRVLIADD EPNIVVSLSF MLKREGYEVL VAPDGTQALA MIRGERPRLV LLDAAMPGMS 
GFEVCEAVRA DPELSGIRIL MLTAKGRDTD IARGMGAGAD AYVTKPFSTR DLIVRIREML
A