More than 300 homologs were found in PanDaTox collection
for query gene Amir_6008 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_6008  HAD-superfamily hydrolase, subfamily IA, variant 1  100 
 
 
227 aa  460  1e-129  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_09020  haloacid dehalogenase superfamily enzyme, subfamily IA  55.56 
 
 
234 aa  257  9e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.532277  normal 
 
 
-
 
NC_013235  Namu_1476  HAD-superfamily hydrolase, subfamily IA, variant 1  36.11 
 
 
259 aa  121  9.999999999999999e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  0.644028  normal  0.407764 
 
 
-
 
NC_013510  Tcur_3180  HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like)  37.71 
 
 
236 aa  117  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  0.177133  n/a   
 
 
-
 
NC_009380  Strop_4215  HAD family hydrolase  34.98 
 
 
226 aa  115  3.9999999999999997e-25  Salinispora tropica CNB-440  Bacteria  normal  normal  0.842339 
 
 
-
 
NC_005957  BT9727_3623  HAD superfamily hydrolase  26.91 
 
 
225 aa  113  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.95626  n/a   
 
 
-
 
NC_011658  BCAH187_A3930  hydrolase, HAD superfamily  28.96 
 
 
207 aa  111  1.0000000000000001e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1566  HAD-superfamily hydrolase, subfamily IA, variant 1  32.22 
 
 
263 aa  103  2e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2525  HAD family hydrolase  34.48 
 
 
245 aa  102  5e-21  Arthrobacter sp. FB24  Bacteria  normal  0.0221998  n/a   
 
 
-
 
NC_011886  Achl_2262  HAD-superfamily hydrolase, subfamily IA, variant 1  33.77 
 
 
248 aa  100  1e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000545934 
 
 
-
 
NC_007355  Mbar_A0557  haloacid dehalogenase-like hydrolase family protein  24.44 
 
 
235 aa  94  2e-18  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.262309  normal 
 
 
-
 
NC_011899  Hore_00240  HAD-superfamily hydrolase, subfamily IA, variant 1  24.35 
 
 
237 aa  92  6e-18  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1203  HAD-superfamily hydrolase, subfamily IA, variant 1  32.76 
 
 
241 aa  92  7e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.481265  normal 
 
 
-
 
NC_014210  Ndas_1951  HAD-superfamily hydrolase, subfamily IA, variant 1  34.55 
 
 
244 aa  92  7e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.305812  hitchhiker  0.0035955 
 
 
-
 
NC_007333  Tfu_1679  HAD family hydrolase  34.35 
 
 
245 aa  89.7  4e-17  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2828  HAD-superfamily hydrolase, subfamily IA, variant 1  33.82 
 
 
231 aa  88.6  7e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.688481 
 
 
-
 
NC_008312  Tery_3660  hydrolase  34.39 
 
 
234 aa  86.3  4e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.150551 
 
 
-
 
NC_007413  Ava_0809  HAD family hydrolase  40 
 
 
218 aa  85.5  7e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2297  HAD-superfamily hydrolase, subfamily IA, variant 1  31.33 
 
 
268 aa  84.3  0.000000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2426  HAD family hydrolase  36.67 
 
 
225 aa  80.5  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0509966  n/a   
 
 
-
 
NC_004116  SAG0751  HAD superfamily hydrolase  24.89 
 
 
300 aa  80.1  0.00000000000003  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2494  HAD superfamily hydrolase  35.24 
 
 
231 aa  80.1  0.00000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000287122  n/a   
 
 
-
 
NC_007604  Synpcc7942_2509  HAD family hydrolase  39.62 
 
 
217 aa  79.3  0.00000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0142502 
 
 
-
 
NC_007963  Csal_3116  HAD family hydrolase  39.68 
 
 
249 aa  79.3  0.00000000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.553412  n/a   
 
 
-
 
NC_013161  Cyan8802_0709  REG-2-like, HAD superfamily (subfamily IA) hydrolase  29.82 
 
 
233 aa  79  0.00000000000006  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0854656 
 
 
-
 
NC_011726  PCC8801_0682  REG-2-like, HAD superfamily (subfamily IA) hydrolase  29.82 
 
 
233 aa  79  0.00000000000006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_1687  HAD-superfamily hydrolase, subfamily IA, variant 3  32.22 
 
 
248 aa  79  0.00000000000006  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0106556 
 
 
-
 
NC_002936  DET0533  HAD family hydrolase  26.44 
 
 
234 aa  78.6  0.00000000000008  Dehalococcoides ethenogenes 195  Bacteria  normal  0.298334  n/a   
 
 
-
 
NC_011658  BCAH187_A2782  hydrolase, haloacid dehalogenase-like family  35.24 
 
 
230 aa  78.6  0.00000000000008  Bacillus cereus AH187  Bacteria  normal  0.195747  n/a   
 
 
-
 
NC_008532  STER_0736  HAD superfamily hydrolase  25 
 
 
300 aa  78.2  0.00000000000009  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2534  HAD superfamily hydrolase  34.29 
 
 
231 aa  77.8  0.0000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.0986265  n/a   
 
 
-
 
NC_014248  Aazo_4818  REG-2-like HAD superfamily hydrolase  33.56 
 
 
217 aa  77.8  0.0000000000001  'Nostoc azollae' 0708  Bacteria  normal  0.153483  n/a   
 
 
-
 
NC_007530  GBAA_2720  HAD superfamily hydrolase  34.29 
 
 
230 aa  77.8  0.0000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0509  HAD family hydrolase  26.92 
 
 
234 aa  78.2  0.0000000000001  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2747  HAD superfamily hydrolase  33.64 
 
 
230 aa  77.4  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00479401  n/a   
 
 
-
 
NC_011725  BCB4264_A2738  hydrolase, haloacid dehalogenase-like family  34.29 
 
 
230 aa  77.4  0.0000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3108  REG-2-like, HAD superfamily (subfamily IA) hydrolase  32 
 
 
215 aa  77  0.0000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008340  Mlg_1990  HAD family hydrolase  35.26 
 
 
234 aa  77.4  0.0000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.169915  normal  0.0795934 
 
 
-
 
NC_013204  Elen_1751  HAD-superfamily hydrolase, subfamily IA, variant 1  39.04 
 
 
230 aa  76.6  0.0000000000003  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.0000165887  normal  0.0449788 
 
 
-
 
NC_013552  DhcVS_474  HAD-superfamily hydrolase, subfamily IA  34.21 
 
 
234 aa  76.3  0.0000000000004  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2564  2-haloalkanoic acid dehalogenase  32.71 
 
 
255 aa  75.9  0.0000000000005  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00980265 
 
 
-
 
CP001800  Ssol_2886  Haloacid dehalogenase domain protein hydrolase  32.88 
 
 
222 aa  75.5  0.0000000000006  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_010717  PXO_02868  hydrolase  42.72 
 
 
245 aa  75.1  0.0000000000007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0262  HAD-superfamily hydrolase, subfamily IA, variant 1  31.8 
 
 
239 aa  74.7  0.000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.381468 
 
 
-
 
NC_012793  GWCH70_1783  HAD-superfamily hydrolase, subfamily IA, variant 1  36.73 
 
 
222 aa  74.3  0.000000000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2458  HAD superfamily hydrolase  32.38 
 
 
231 aa  73.9  0.000000000002  Bacillus cereus E33L  Bacteria  normal  0.536577  n/a   
 
 
-
 
NC_010524  Lcho_2564  HAD family hydrolase  42.31 
 
 
231 aa  73.6  0.000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0054388 
 
 
-
 
NC_008463  PA14_69720  putative hydrolase  33.33 
 
 
232 aa  73.6  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.673064  normal  0.5613 
 
 
-
 
NC_008530  LGAS_0027  HAD superfamily hydrolase  23.01 
 
 
235 aa  73.9  0.000000000002  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_1147  HAD-superfamily hydrolase, subfamily IA, variant 1  31.39 
 
 
223 aa  73.9  0.000000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.29444  n/a   
 
 
-
 
NC_014212  Mesil_1705  HAD-superfamily hydrolase, subfamily IA, variant 1  40 
 
 
260 aa  73.2  0.000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.495652  normal 
 
 
-
 
NC_010002  Daci_2563  HAD family hydrolase  38.89 
 
 
256 aa  72  0.000000000008  Delftia acidovorans SPH-1  Bacteria  normal  0.764506  normal  0.125502 
 
 
-
 
NC_010483  TRQ2_1642  HAD family hydrolase  26.44 
 
 
225 aa  70.9  0.00000000001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1576  HAD family hydrolase  26.44 
 
 
225 aa  70.9  0.00000000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2493  hydrolase  42.45 
 
 
235 aa  71.2  0.00000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.668245 
 
 
-
 
NC_010625  Bphy_5842  haloacid dehalogenase, type II  38.28 
 
 
234 aa  70.1  0.00000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_3624  HAD-superfamily hydrolase, subfamily IA, variant 1  26.21 
 
 
231 aa  70.1  0.00000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.795882  normal  0.707115 
 
 
-
 
NC_009654  Mmwyl1_3585  HAD family hydrolase  28.76 
 
 
237 aa  69.7  0.00000000003  Marinomonas sp. MWYL1  Bacteria  normal  0.0700398  normal 
 
 
-
 
NC_011884  Cyan7425_2328  REG-2-like, HAD superfamily (subfamily IA) hydrolase  38.3 
 
 
245 aa  69.7  0.00000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.139585  normal 
 
 
-
 
NC_009656  PSPA7_6024  putative hydrolase  36.22 
 
 
232 aa  69.7  0.00000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1151  HAD family hydrolase  41.86 
 
 
219 aa  69.3  0.00000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.205266  hitchhiker  0.00490249 
 
 
-
 
NC_003909  BCE_3362  HAD superfamily hydrolase  26.78 
 
 
236 aa  69.3  0.00000000005  Bacillus cereus ATCC 10987  Bacteria  normal  0.0552975  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3072  HAD family hydrolase  26.32 
 
 
236 aa  68.9  0.00000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.302299  n/a   
 
 
-
 
NC_008782  Ajs_1653  HAD family hydrolase  36.84 
 
 
230 aa  69.3  0.00000000005  Acidovorax sp. JS42  Bacteria  normal  0.144199  normal  0.146413 
 
 
-
 
CP001800  Ssol_1784  HAD-superfamily hydrolase, subfamily IA, variant 1  25.54 
 
 
242 aa  68.9  0.00000000006  Sulfolobus solfataricus 98/2  Archaea  normal  0.899574  n/a   
 
 
-
 
NC_014230  CA2559_05620  putative haloacid dehalogenase-like hydrolase protein  22.11 
 
 
229 aa  68.9  0.00000000006  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2189  HAD-superfamily hydrolase, subfamily IA, variant 1  45.57 
 
 
219 aa  68.9  0.00000000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013521  Sked_11020  haloacid dehalogenase superfamily enzyme, subfamily IA  31.31 
 
 
274 aa  68.9  0.00000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009042  PICST_41148  predicted protein  33.06 
 
 
317 aa  68.6  0.00000000007  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.107357 
 
 
-
 
NC_004578  PSPTO_0221  HAD-superfamily hydrolase  29.41 
 
 
230 aa  68.2  0.0000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3370  hydrolase, haloacid dehalogenase-like family  25.51 
 
 
236 aa  68.2  0.0000000001  Bacillus cereus AH187  Bacteria  normal  0.013018  n/a   
 
 
-
 
NC_011206  Lferr_1882  Haloacid dehalogenase domain protein hydrolase  38.46 
 
 
248 aa  67.8  0.0000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0746136  normal  0.527503 
 
 
-
 
CP001800  Ssol_2691  HAD-superfamily hydrolase, subfamily IA, variant 1  38.32 
 
 
212 aa  67.4  0.0000000002  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_007498  Pcar_1388  haloacid dehalogenase  26.43 
 
 
234 aa  67.4  0.0000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_2227  HAD-superfamily hydrolase, subfamily IA  38.46 
 
 
208 aa  67  0.0000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.672436  n/a   
 
 
-
 
NC_011830  Dhaf_2476  HAD-superfamily hydrolase, subfamily IA, variant 1  25.56 
 
 
225 aa  67.4  0.0000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00341069  n/a   
 
 
-
 
NC_012803  Mlut_08650  haloacid dehalogenase superfamily enzyme, subfamily IA  30.54 
 
 
261 aa  67  0.0000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0704  haloacid dehalogenase-like hydrolase  25.25 
 
 
231 aa  67  0.0000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.463246  normal  0.864545 
 
 
-
 
NC_008543  Bcen2424_3567  HAD family hydrolase  34.4 
 
 
240 aa  67.4  0.0000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.210535  normal 
 
 
-
 
NC_011992  Dtpsy_2051  HAD-superfamily hydrolase, subfamily IA, variant 1  36.84 
 
 
230 aa  67.4  0.0000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.0164056  n/a   
 
 
-
 
NC_013743  Htur_2785  HAD-superfamily hydrolase, subfamily IA, variant 1  34.92 
 
 
235 aa  66.6  0.0000000003  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007005  Psyr_0186  HAD family hydrolase  34.38 
 
 
230 aa  66.6  0.0000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3346  hydrolase, haloacid dehalogenase-like family  24.69 
 
 
236 aa  66.2  0.0000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_4115  HAD-superfamily hydrolase, subfamily IA, variant 1  34.29 
 
 
237 aa  66.2  0.0000000004  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5202  HAD family hydrolase  23.48 
 
 
231 aa  66.2  0.0000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_0203  HAD-superfamily hydrolase, subfamily IA, variant 1  28.63 
 
 
228 aa  66.2  0.0000000004  Natrialba magadii ATCC 43099  Archaea  normal  0.423986  n/a   
 
 
-
 
NC_007511  Bcep18194_B2556  HAD family hydrolase  27.35 
 
 
240 aa  66.2  0.0000000004  Burkholderia sp. 383  Bacteria  normal  normal  0.630075 
 
 
-
 
NC_007948  Bpro_2014  HAD family hydrolase  36.27 
 
 
231 aa  65.9  0.0000000004  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3953  HAD family hydrolase  32.58 
 
 
240 aa  66.2  0.0000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.261724 
 
 
-
 
NC_009441  Fjoh_0412  HAD family hydrolase  23.01 
 
 
228 aa  65.9  0.0000000005  Flavobacterium johnsoniae UW101  Bacteria  normal  0.251676  n/a   
 
 
-
 
NC_011662  Tmz1t_0925  phosphoglycolate phosphatase  39.45 
 
 
224 aa  65.5  0.0000000006  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0667  HAD-superfamily hydrolase, subfamily IA, variant 1  25.33 
 
 
232 aa  65.5  0.0000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2972  HAD family hydrolase  36.8 
 
 
231 aa  65.5  0.0000000006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0648694 
 
 
-
 
NC_008817  P9515_14061  hypothetical protein  25.36 
 
 
248 aa  65.5  0.0000000007  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.180582  n/a   
 
 
-
 
NC_009457  VC0395_A2390  hypothetical protein  38.71 
 
 
239 aa  65.1  0.0000000008  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1511  HAD family hydrolase  33.33 
 
 
203 aa  65.1  0.0000000008  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_010322  PputGB1_5292  HAD family hydrolase  29 
 
 
231 aa  65.1  0.0000000008  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3367  hydrolase, haloacid dehalogenase-like family  24.69 
 
 
236 aa  65.1  0.0000000009  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_0046  HAD-superfamily hydrolase, subfamily IA, variant 1  30.81 
 
 
216 aa  64.7  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2501  HAD-superfamily hydrolase, subfamily IA, variant 1  37.86 
 
 
243 aa  64.7  0.000000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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