Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1783 |
Symbol | |
ID | 7979453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 1852674 |
End bp | 1853342 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644798622 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002949794 |
Protein GI | 239827170 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGG CAGTCATCTT TGATTTGGAT GGCACATTGC TAAATCGCGA CGTTTCCATA CAAAAGTTTA TCGAATACCA GTATGAGCGC TTGCAGTTAT GGTTAAGCCA TATTCCGAAA GAATCGTATA TCGCTAGATT CATTGAATTA GATAATCGAG GGTATGTTTG GAAAGATGCT GTATATCAAC AAATGGTCAA AGAATTCGAG ATTATTGGCA TCACGTGGGA AGATTTACTA GAAGATTATA TGAATCATTT TCACAAAAGC TGTGCCCCGT TTCCTCACCT TGTATGGATG TTAGAAGAGT TAAAAAGAAA GTCATTGAAA TTAGGAATCA TCACAAATGG AAAAGGACAA TTTCAAATGC ATTCGATAAA GGTGTTAGGC ATTGAAGGCT ATTTTGATAC GATTCTTATC TCGGAATGGG AAGGAATTAG TAAACCAGAT CCCCGACTAT TTCAAAAAGC GATGGATCAT TTGAATGTCC TGCCAAATGA AAGCGTATTT GTTGGCGACC ATCCAATCAA CGACATTCAA GCGGCACGGA ATATAGGGAT GAAAACCATT TGGAAAAAGG ATGTGGCATA CGAGTCTGTG GAAGCAGATT TTGTCATAGA AGATTTAAGA GAAATTCCAG GAATCATCGA AACGCTTCAG CAACAATAA
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Protein sequence | MMKAVIFDLD GTLLNRDVSI QKFIEYQYER LQLWLSHIPK ESYIARFIEL DNRGYVWKDA VYQQMVKEFE IIGITWEDLL EDYMNHFHKS CAPFPHLVWM LEELKRKSLK LGIITNGKGQ FQMHSIKVLG IEGYFDTILI SEWEGISKPD PRLFQKAMDH LNVLPNESVF VGDHPINDIQ AARNIGMKTI WKKDVAYESV EADFVIEDLR EIPGIIETLQ QQ
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