Gene GWCH70_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1783 
Symbol 
ID7979453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1852674 
End bp1853342 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content38% 
IMG OID644798622 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_002949794 
Protein GI239827170 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGG CAGTCATCTT TGATTTGGAT GGCACATTGC TAAATCGCGA CGTTTCCATA 
CAAAAGTTTA TCGAATACCA GTATGAGCGC TTGCAGTTAT GGTTAAGCCA TATTCCGAAA
GAATCGTATA TCGCTAGATT CATTGAATTA GATAATCGAG GGTATGTTTG GAAAGATGCT
GTATATCAAC AAATGGTCAA AGAATTCGAG ATTATTGGCA TCACGTGGGA AGATTTACTA
GAAGATTATA TGAATCATTT TCACAAAAGC TGTGCCCCGT TTCCTCACCT TGTATGGATG
TTAGAAGAGT TAAAAAGAAA GTCATTGAAA TTAGGAATCA TCACAAATGG AAAAGGACAA
TTTCAAATGC ATTCGATAAA GGTGTTAGGC ATTGAAGGCT ATTTTGATAC GATTCTTATC
TCGGAATGGG AAGGAATTAG TAAACCAGAT CCCCGACTAT TTCAAAAAGC GATGGATCAT
TTGAATGTCC TGCCAAATGA AAGCGTATTT GTTGGCGACC ATCCAATCAA CGACATTCAA
GCGGCACGGA ATATAGGGAT GAAAACCATT TGGAAAAAGG ATGTGGCATA CGAGTCTGTG
GAAGCAGATT TTGTCATAGA AGATTTAAGA GAAATTCCAG GAATCATCGA AACGCTTCAG
CAACAATAA
 
Protein sequence
MMKAVIFDLD GTLLNRDVSI QKFIEYQYER LQLWLSHIPK ESYIARFIEL DNRGYVWKDA 
VYQQMVKEFE IIGITWEDLL EDYMNHFHKS CAPFPHLVWM LEELKRKSLK LGIITNGKGQ
FQMHSIKVLG IEGYFDTILI SEWEGISKPD PRLFQKAMDH LNVLPNESVF VGDHPINDIQ
AARNIGMKTI WKKDVAYESV EADFVIEDLR EIPGIIETLQ QQ