| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2972 |
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| Symbol | |
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| ID | 4688647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3140528 |
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| End bp | 3141223 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639835985 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_983192 |
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| Protein GI | 121605863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0648694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC TTACCCTTAT CAAAGCCATC ACCCTCGATC TGGACGATAC CCTCTGGCCG
GTCTGGCCGG CCATCGAGCG GGCCGAGCAG GCGCTGCTTG ACTGGCTGGC CCGGCATGCC
CCACGGACGG CGGCATTGCA GGCCCAGCCG GCGGCGCGCC ACGAGATTCG CGAGCATGTC
AACGGCCTGC ACCCGGAGCT CAAGCACAAC CTGAGCGCCT TGCGCACCAA GGCGATCCGG
CTGGCCCTGA GCCGCAGCGG AGAAGACCCG GATCTGGCCG AACCGGCGTT CGACATCTTT
TTTGCCGCGC GCAACCAGGT CACGCTGTTC GGCGACGTGC CGCAGTCGCT GGAATTTCTG
GCGGGCCGCT TTCCGCTGGT GGCGCTGTCC AACGGCAACG CCGACATCGA GCGCATCGGC
ATCGGACCCT ATTTCAAGGC CAGCCTCAGC GCCCAGCAGT TCGGCGTCGG CAAGCCCGAC
CCGCGCATTT TCCGGGCGGC GGCCACGGCG GCCGGGGTGC AGCCGCATGA AGTGCTGCAT
GTCGGCGACG ACGCCGCGCT CGATGTGCTG GCGGCGCTCG ATTGCGGCAT GCAGGCGGTC
TGGGTCAACC GCGCCGGCTT GCCGTGGCCG CATGATGCGC TGCCGCATCA GGCCGTGGCC
ACGCTGGCTG AACTTTGCGG CGTGCTGGCT ACCTGA
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| Protein sequence | MLDLTLIKAI TLDLDDTLWP VWPAIERAEQ ALLDWLARHA PRTAALQAQP AARHEIREHV
NGLHPELKHN LSALRTKAIR LALSRSGEDP DLAEPAFDIF FAARNQVTLF GDVPQSLEFL
AGRFPLVALS NGNADIERIG IGPYFKASLS AQQFGVGKPD PRIFRAAATA AGVQPHEVLH
VGDDAALDVL AALDCGMQAV WVNRAGLPWP HDALPHQAVA TLAELCGVLA T
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