| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1476 |
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| Symbol | |
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| ID | 8447072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1631267 |
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| End bp | 1632046 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645040605 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003200864 |
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| Protein GI | 258651708 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.644028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.407764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGAGG GCGGTCCCCG GCCGGGCGGC CCGCTGTCCG CCGTCCTGTT CGACGTCGAC
GACACCCTCA TCGACTTCGC CGGTGCGGCC CGGGCCGCGC TGTCCGATCT GGTGCTGGCC
GCGCTGGGGG CCGGTCCGGG GCGTGACACC ACCGCGGATC AGGACCTGCT CGAGGCCGCG
CACCGGGCCT GGCGCCAGGT CTCGGAACGG GAGTACACCC GCTTCACCCT CGGTGAGCTG
GACTTCGACC AGATGCGGCG CAGCCGGATG GCGGCCTTCC TCCAGGCGAT CGATCGACCC
GCGGCCCGCG AACTGGACCA CGAGCTGATG GAGCAGCGGC GGCACGAGGC GATCTTTGGG
CACTTCCGCG CGTTCGCCGA CGTCCGGCCG GCGCTGGACC GGCTGCGGCG GGCCGGTATC
GCCGTGCACG TGCTGTCCAA CAGCGACGGG CCGCATCAGC GGGCCAAGCT CGCGGCGGTG
GGGCTGGACG AGCTGGCCGC GGACGGGTTC TATTCCGGCG ATCTGGGCGT GGCCAAGCCG
GACCCGCAGA TCTTTCGGCT GGCCGCCGAG CGGCTCGGCC GGGCGCCGGC CGAGCTGGCC
TACGTGGGAG ACCGCTGGGA TGTCGACGTG CTGGGATCCG CAGCCGCCGG GTTGGCCCCG
GTGTGGCTCA ATCGAGCCGG ACTCGCCCGG CCGGACCAGG CCGCCGCGGC CGGTGCGGTC
GTCCAGATCG CCACCCTGGA CGAGCTCGTC GTCGACGCCG ACGGGCTGCA TTTGGGATGA
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| Protein sequence | MPEGGPRPGG PLSAVLFDVD DTLIDFAGAA RAALSDLVLA ALGAGPGRDT TADQDLLEAA
HRAWRQVSER EYTRFTLGEL DFDQMRRSRM AAFLQAIDRP AARELDHELM EQRRHEAIFG
HFRAFADVRP ALDRLRRAGI AVHVLSNSDG PHQRAKLAAV GLDELAADGF YSGDLGVAKP
DPQIFRLAAE RLGRAPAELA YVGDRWDVDV LGSAAAGLAP VWLNRAGLAR PDQAAAAGAV
VQIATLDELV VDADGLHLG
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