Gene Plim_4115 details

Gene Information

• Locus tag: Plim_4115
• ID: 9140835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 5279905
• End bp: 5280618
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 51%
• Product: HAD-superfamily hydrolase, subfamily IA, variant 1
• Protein accession: YP_003632125
• Protein GI: 296124347

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCATC GATTTCTGAG AGACAGATCG ATTCGTTGTG TGGCCTTGGA TGCTTTTGGA 
ACGATCATCA CGCCCGGCGA ATCGATTGTC ACCATTTATC ATCGAGCAGG TCTTCAAAGG 
GGAAGCACAC TTTCGGAAGT CGAGGTCGGT TCGCGATTTC GAATGGCCTA TCGATCCCGG 
CAGACAGGAA CACAAACATC TCACGGTGAA GAGATCAGAT TCTGGCGCGA AGTTGTGGCA 
AATGTTTTCC AGGAATTGCC ACCACAAAAG ATCGACGACT GCTTTGACGA GCTCTGGCAT 
AAGTTTGCTG ACCTGGGCTC CTGGCGACTC TTCCCGGATG TGGTTCCCGC ACTCGATGCG 
TTGAAAGCCT CTGGGATCAA GGTTCTGCTG GCCAGTAATT TCGATGATCG ACTGATCGAG 
ATTCTCAGGG GGTTTTCGCT GCTTGATCGA TTTGACGAAC TCTTGATTTC GAGCCAGGTG 
GGTTGGCGAA AACCTGCAGC AGAATTTTAT CGTGCCGTCT TTGAAGCCGC GGGAACGAAG 
AGCCCATCGA TCAGCCCGGC ACAAATTTTC ATGGTGGGCG ATGACTATGA GCATGATGTT 
GAAGCTGCCA GAAGAGCAGG ATTCAGCGCC ATCCAGATCT GCCGTGATCC TGCTCAGGTG 
GATCTCCTCC CCTCACAGAT TTCTTCACTG ACAGAGCTTT TTGAAAATTC CTGA 

 

Protein sequence

MTHRFLRDRS IRCVALDAFG TIITPGESIV TIYHRAGLQR GSTLSEVEVG SRFRMAYRSR 
QTGTQTSHGE EIRFWREVVA NVFQELPPQK IDDCFDELWH KFADLGSWRL FPDVVPALDA 
LKASGIKVLL ASNFDDRLIE ILRGFSLLDR FDELLISSQV GWRKPAAEFY RAVFEAAGTK 
SPSISPAQIF MVGDDYEHDV EAARRAGFSA IQICRDPAQV DLLPSQISSL TELFENS