| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0221 |
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| Symbol | |
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| ID | 1181829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 243235 |
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| End bp | 243927 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391590 |
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| Product | HAD-superfamily hydrolase |
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| Protein accession | NP_790072 |
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| Protein GI | 28867453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAGC TGGTGACGTT CGATCTCGAC GACACGCTCT GGGACACCGC GCCTGCCATT
GTCGGCGCAG AAGCCGCGCT GCGTGACTGG CTGGCCGAGC AGGCGCCAAA GCTCGGGCCG
GTCCCCGTGG AGCATCTGTG GGAAATCCGC TCACGCCTGC TGGACGAAGA CCCTTCGTTC
AAGCACCGGA TCAGTGCACT GCGACGCCGC GTGCTGTTTC ACGCCCTTGA AGATGCTGGC
TACGACTCCG ACGAAGCTCA GCAACTGGCC GACGAGAGCT TTGAAGTCTT TCTGCATGGC
CGCCATCAAG TGCAGATTTT CCCGGAGGTG CAGCCCACTC TGGAAATTCT CGCCAAGACC
TTCACGCTCG GCGTTATCAC CAACGGCAAT GCTGACGTGC GTCGCCTGGG GCTGGCCGAC
TACTTTGCCT TTGCCCTGTG TGCCGAGGAC CTGGGCATCG GCAAGCCCGA CCCGGCCCCG
TTTCTCGAAG CGCTGCGCCG TGCAAAAGTC GATGCCAGCG CGGCCGTGCA CGTCGGCGAC
CACCCCAGCG ACGACATTGC CGGCGCACAA CAGGCGGGCA TGCGCGCCAT TTGGTACAAC
CCGCAGGGCA AGGCATGGGA CGCAGATCGC TTGCCGGATG CCGAGATTCA CAACCTGTCG
CAATTGCCGG AAGTACTGGC GCGCTGGGCC TGA
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| Protein sequence | MIKLVTFDLD DTLWDTAPAI VGAEAALRDW LAEQAPKLGP VPVEHLWEIR SRLLDEDPSF
KHRISALRRR VLFHALEDAG YDSDEAQQLA DESFEVFLHG RHQVQIFPEV QPTLEILAKT
FTLGVITNGN ADVRRLGLAD YFAFALCAED LGIGKPDPAP FLEALRRAKV DASAAVHVGD
HPSDDIAGAQ QAGMRAIWYN PQGKAWDADR LPDAEIHNLS QLPEVLARWA
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