| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0027 |
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| Symbol | |
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| ID | 4440416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 26636 |
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| End bp | 27343 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639671889 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | YP_813880 |
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| Protein GI | 116628708 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATATA AACAATTAAT TTTTGACGTT GATGATACTT TGATCGACTT TGCGGCTACG
GAAGATTCAT CTTTGCATGC ATTATTTAAA TCGCACAAGT TGCCTCTTTC TTCTGATTTG
CAGAAACAAT ATCATACTTA TAATCAAGGG CTTTGGCGCA GGCTTGAATT AGGTGAGATT
ACGTATGATG AGCTAAGTGA GATGACTTTT CATGATTTTA TTAAAGAGCA TTTTAATCTA
GAGGTAGATG GTAATGAATG GATGAACGAA TACCGTTCTT ATTTTGGCGA AGCGCACCAG
TTGTTGCCTG GTGTAGAAGA CACGCTTAGG TTTGCGAAGA AGCAGGGATA TAAGTTAACT
GTATTAAGTA ACGGCGAAAA GTTTATGCAG CGTCACCGCT TAGAGTTAGC TGGAATTAAG
GACTACTTTG ACTTAATTGT AACGTCTGAA GAGGCACATT ATTCTAAGCC TGATCCACAT
GCCTTTGATT ATTTCTTTAG TAGAACTGAA ATTGGTCCGA ATGAAACCTT GTTCTTTGGG
GATGGGTTGC AGTCAGATAT TTTAGGTGCT GAAAAATACG GCTTTGATAG TATTTGGTAT
AATCATCGTC ACAGAAAAGA TACTATTGGT CTTCATCCCT TATTTGAGGT CGAAACTTAT
CCTGAATTTG TAAAAATAAT GCAAAATGAT TTTCAAAAAG CATATTAA
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| Protein sequence | MKYKQLIFDV DDTLIDFAAT EDSSLHALFK SHKLPLSSDL QKQYHTYNQG LWRRLELGEI
TYDELSEMTF HDFIKEHFNL EVDGNEWMNE YRSYFGEAHQ LLPGVEDTLR FAKKQGYKLT
VLSNGEKFMQ RHRLELAGIK DYFDLIVTSE EAHYSKPDPH AFDYFFSRTE IGPNETLFFG
DGLQSDILGA EKYGFDSIWY NHRHRKDTIG LHPLFEVETY PEFVKIMQND FQKAY
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