Gene Ndas_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1951 
Symbol 
ID9245801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2375008 
End bp2375742 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content71% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_003679884 
Protein GI297560910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.305812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0035955 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGAACA CACCCGCAGT GCCGACGGCG ATCTGCTTTG ACCTGGACGA CACCCTGATC 
GACGATCTCG CCGCGTCGTC CACGGGGCTC CGCGCGGTCA TGGACCGGCT CGGCCACCCG
GACTTCGGAG CAGCCCGCAG TCTGTGGGAC GTGCAGACCG AGATCTCCTT CGGTTCCTAC
CTGCGCGGAC GCCTGAGCCT GGAGCAGCAG CGCCGCGAGC GGATCCGGGC CCTGGCCGTC
CAGGCCGGTC ACCCCGACCT CGCCGACCAG CACTGCGACG AGTTGTACCG GATCTACCTG
GAGGCCCACC GCTCGGCGTG GCAGGTCTTC CCCGACGCGA TCCCGGCGCT GAACGCGCTG
GCCTCGGCCG GATACCGCCT GGCCGTGGTG ACCAACGGCA TCGAGTCCCT CCAGCACGCC
AAGCTCCAGT CCATGGAGCT GGCCCCCTAC TTCCACGCCG TGGTGTGCAC CGACACGGTC
GGAACGGGCA AGCCGGACCC GCGCATCTTC CACACCGCCG CCCAGCGCCT GGGTGTGGAC
CCCACCGCGT GCTGGCACGT GGGGGACCAG ATCCAGGCCG ACGGCGTGGG CGCCGCGGCC
GCGAGCATGC GCCCGATCAT GATCGACCGC CGGGGCCACC AGCGGTTCGA GTCGGTGACC
ACCATCGCCA ACCTGGACGA ACTGCTGCGT CTGGTGGGCC TGCCCAGCGC GACCCCCGCC
GCCGGATCGC TGTGA
 
Protein sequence
MPNTPAVPTA ICFDLDDTLI DDLAASSTGL RAVMDRLGHP DFGAARSLWD VQTEISFGSY 
LRGRLSLEQQ RRERIRALAV QAGHPDLADQ HCDELYRIYL EAHRSAWQVF PDAIPALNAL
ASAGYRLAVV TNGIESLQHA KLQSMELAPY FHAVVCTDTV GTGKPDPRIF HTAAQRLGVD
PTACWHVGDQ IQADGVGAAA ASMRPIMIDR RGHQRFESVT TIANLDELLR LVGLPSATPA
AGSL