Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1951 |
Symbol | |
ID | 9245801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2375008 |
End bp | 2375742 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_003679884 |
Protein GI | 297560910 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.305812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0035955 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGAACA CACCCGCAGT GCCGACGGCG ATCTGCTTTG ACCTGGACGA CACCCTGATC GACGATCTCG CCGCGTCGTC CACGGGGCTC CGCGCGGTCA TGGACCGGCT CGGCCACCCG GACTTCGGAG CAGCCCGCAG TCTGTGGGAC GTGCAGACCG AGATCTCCTT CGGTTCCTAC CTGCGCGGAC GCCTGAGCCT GGAGCAGCAG CGCCGCGAGC GGATCCGGGC CCTGGCCGTC CAGGCCGGTC ACCCCGACCT CGCCGACCAG CACTGCGACG AGTTGTACCG GATCTACCTG GAGGCCCACC GCTCGGCGTG GCAGGTCTTC CCCGACGCGA TCCCGGCGCT GAACGCGCTG GCCTCGGCCG GATACCGCCT GGCCGTGGTG ACCAACGGCA TCGAGTCCCT CCAGCACGCC AAGCTCCAGT CCATGGAGCT GGCCCCCTAC TTCCACGCCG TGGTGTGCAC CGACACGGTC GGAACGGGCA AGCCGGACCC GCGCATCTTC CACACCGCCG CCCAGCGCCT GGGTGTGGAC CCCACCGCGT GCTGGCACGT GGGGGACCAG ATCCAGGCCG ACGGCGTGGG CGCCGCGGCC GCGAGCATGC GCCCGATCAT GATCGACCGC CGGGGCCACC AGCGGTTCGA GTCGGTGACC ACCATCGCCA ACCTGGACGA ACTGCTGCGT CTGGTGGGCC TGCCCAGCGC GACCCCCGCC GCCGGATCGC TGTGA
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Protein sequence | MPNTPAVPTA ICFDLDDTLI DDLAASSTGL RAVMDRLGHP DFGAARSLWD VQTEISFGSY LRGRLSLEQQ RRERIRALAV QAGHPDLADQ HCDELYRIYL EAHRSAWQVF PDAIPALNAL ASAGYRLAVV TNGIESLQHA KLQSMELAPY FHAVVCTDTV GTGKPDPRIF HTAAQRLGVD PTACWHVGDQ IQADGVGAAA ASMRPIMIDR RGHQRFESVT TIANLDELLR LVGLPSATPA AGSL
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