Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2476 |
Symbol | |
ID | 7259447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 2673540 |
End bp | 2674217 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643562362 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002458940 |
Protein GI | 219668505 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E [TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00341069 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATAAAG CTTTATTCTT TGATGTGGAT GATACCCTGC TGAATTTCGA ACAGTGTAGC AGGGAAGCAC TGGGCAAGAC ATTCCGTCAT TTCAGTATGG ACTACGATGA CACCGTTTAC GAGCTGTTCC GCAGCATAGA CCAGCGATTA TGGCTTCAGC AAAAGCAAGG CGAACTTACC GTTCAGGATG TCATCAATCT TAGATTTCAA GAATTATTTA AACAGCTCCA GCTTGGGTGT TCTCATATCC CTTTGCAGAC GATGTTCCAG GAGAGATTGG CGGAAGAGTT TTTCACTGAA CCCCATGCGG CAGAATCCCT GGGCTATTTA AGCGCTCGCT ACCAACTCTT TGTGACCTCC AACGGTATTT TGAAAACCCA GTTGAAGCGT CTGGAGTTAG CCGGCTTATT GCCGTATTTT ACAGATGTAT TTGTCTCTGA CCATATCGGC CATGAAAAGC CCAGTGTCCG GTTTTTTGAG GAGTGCTTGC AAAGAAGCAG GTTGAAGCCC AGCGAGGTGC TGCTCATCGG CGATAGCCTT GAAGCGGATA TGGTCGGGGC CCAAACCAGC AAGATGGACT CTTGCTGGTA TAATCCCAAG CATAGGAACA CGGATTCTGA TGTTGAGATT GATTATATTA TTTCAGATTT GCTGCAGCTT AAAGACATAC TGCAATAA
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Protein sequence | MYKALFFDVD DTLLNFEQCS REALGKTFRH FSMDYDDTVY ELFRSIDQRL WLQQKQGELT VQDVINLRFQ ELFKQLQLGC SHIPLQTMFQ ERLAEEFFTE PHAAESLGYL SARYQLFVTS NGILKTQLKR LELAGLLPYF TDVFVSDHIG HEKPSVRFFE ECLQRSRLKP SEVLLIGDSL EADMVGAQTS KMDSCWYNPK HRNTDSDVEI DYIISDLLQL KDILQ
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