Gene Bcep18194_B2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B2556 
Symbol 
ID3754323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp2907040 
End bp2907762 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID637767404 
ProductHAD family hydrolase 
Protein accessionYP_373311 
Protein GI78063403 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.630075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCA CCCAAGTTTC CGCTCTCTCG TTCGACCTGG ACGACACCCT GTGGCCGTTC 
GGGCCGTCCG TCGTACGGGC CGAAGCGACG CTTCGCACGT GGCTGATCGA GCATGCGCCC
GGTACCGAGC GTGTGCTGCC CACGCAGCAG TCGCTAAGCG ACTTGCGTGA GGAATACGAA
CGATTGTGTC CCGAGCTTGC CGGCGACTTC CGTGCCATGA GAATCGGGTC GATCAGGCTT
GCGCTGGAGC GTGCGAACGA AGATGTCGCG CTCACCGACC GTGCGTACGC CGCCTTCTAT
GCCGCGCGCA ACCGGGTCGA ATTCTATGAC GATGCATTGC CGGCGCTCGC GTGGCTGAGC
GCGCGGTTTC CGTTGATCGC GGTGACCAAC GGCAACGCGG ACCTCCGGCT GACCGGCGGC
GGCGAATTCT TTCGTGCGAC GCTCAGCGCG CAGGCGTTCG GCGTCGCGAA GCCTGAGCCC
GGGATCTTTC ATGCGGCAGC GGAAACGCTC GACGTGCAGC CGGCGGAACT GCTGCATGTC
GGCGACGACT ATCACCTCGA TATCGTCGGT GCGTTGAACG CGGGGCTTCA GGCCGCGTGG
GTGGTTCGCG ATACGCATCC GGAAGCGGAG CGTGCGCAGC AACAGGCCGC GACGCCGCAC
CTCACGCTCA GCGACCTGTC GATGCTGTGC CGCATGCTCG GCGGGCCTGA CGACGTCGCG
TGA
 
Protein sequence
MRLTQVSALS FDLDDTLWPF GPSVVRAEAT LRTWLIEHAP GTERVLPTQQ SLSDLREEYE 
RLCPELAGDF RAMRIGSIRL ALERANEDVA LTDRAYAAFY AARNRVEFYD DALPALAWLS
ARFPLIAVTN GNADLRLTGG GEFFRATLSA QAFGVAKPEP GIFHAAAETL DVQPAELLHV
GDDYHLDIVG ALNAGLQAAW VVRDTHPEAE RAQQQAATPH LTLSDLSMLC RMLGGPDDVA