| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0533 |
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| Symbol | |
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| ID | 3230149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 486760 |
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| End bp | 487464 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637120099 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_181277 |
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| Protein GI | 57234680 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.298334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAG GTGTTTTCTT TGACCTGTAT AATACCCTGA TAGGATACCA GCCCAGCCGC
GAGGAGATGA CGGTTAAGCT GCTTGCCGAA CTGGGCTACA CGATAAATGA AGATGACCTC
TACCTGCCCG TGAACAAGGC TGACGAATAT TTTTACCAGC AAAATGCCCA AAAACCTATA
AGCCTGAGGG AAAGAGCGGA ACAAATGGCG GTTTGGAGCC ACTATTACCG GATTATCCTT
GAGGAAATTG GTATTGAGCC CAAACCTGAG CTTATAAATA ACCTGATTAG CCGCTGGAAA
AACCTGAAAT GGGAGATGAC CCTCTATCAA GATGTAATAC CCTGCCTGGA AAACCTGAAA
AAGCGCAACC TGAAAATAGG GCTTATTTCA AACGCCGAGA AAGATATGTC CGAACTTTTT
AACAAAACCG GATTAAATAA ATATCTGGAA ACGGTAGTGA TTTCTCAGGA GGTGGGCGTA
ACTAAACCCA ATCCCCTTAT TTTTCAGGCA GCCCTGAAAA AAAGCGGCCT GACTGCCAAA
GAAGTACTAT ACATAGGTGA CCAGTATCAG GTAGATTATA TGGGAGCAAT GAATGTCGGG
CTGAACCCCG TTCTGCTTGA CCGGCGTAAC TGTTATCTGG ATTTGAAAGA TTGCCGCAGG
ATAACCGGGC TGGCTGAGCT GGAGTATTGC ATAGACAATA CTTAG
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| Protein sequence | MIKGVFFDLY NTLIGYQPSR EEMTVKLLAE LGYTINEDDL YLPVNKADEY FYQQNAQKPI
SLRERAEQMA VWSHYYRIIL EEIGIEPKPE LINNLISRWK NLKWEMTLYQ DVIPCLENLK
KRNLKIGLIS NAEKDMSELF NKTGLNKYLE TVVISQEVGV TKPNPLIFQA ALKKSGLTAK
EVLYIGDQYQ VDYMGAMNVG LNPVLLDRRN CYLDLKDCRR ITGLAELEYC IDNT
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