| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2390 |
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| Symbol | |
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| ID | 5137770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2545616 |
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| End bp | 2546335 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533842 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218290 |
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| Protein GI | 147675542 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTTT ACCGCCCATT GGCTTCGATT CAAGCACTGA CGTTTGATTT GGACGATACC
CTTTACGATA ACCGTCCGGT CATCAAACAG GTCGAGGAAA AAGTCACTGA GTGGTTGTTA
AGTGAGCATC CCATTACGGC GACGCGTCCT TTGGCTTGGT GGCTGGCGAT GAAGCGTGAT
ATAGCGCGCC GCTTTCCGGA GCAGTGCCAT GATGTGAGCC AATGGCGTTA TTTACAGGTG
CAGCATGGTT TACTGGAATT AGGCTATGCG CAGCCAGAGG CGGAGCAAGC GGCGAGCGAG
ACGCTTGAGC AAGTGATGCG CTGGCGTAAT CAAGTCGATG TTCCTGCCGA AACGCATCGG
GTGTTGGCTC AGTTAGCGGC TAAAGTGCCG CTGATTGCGA TCACCAATGG CAATGTCCAG
ATAGAAAAAA TTGGTTTAAG TGGCTATTTC CAAACGGTAT TGCGCGCAGG GCCAGACGGC
CGTGCCAAAC CGTATCCCGA TCTCTTTGCA CAAGCAGCAC AACAGCTTCA GCTTGAGCCC
CGTTCAATCT TGCATGTCGG GGATCATTTA CAAACCGATG TGCTAGGGGC GCGGCAAAAT
GGTTTTCAAG CCTGCTGGTT TAACGATCAA GGGCAGAGTA TTCGTCGGCT CGCCAAAGCG
AGCGTATTAC CCGACGTGGA GATCGAGCGT CTCTCGGAAT TACTTCTGAT AGTTAACTAG
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| Protein sequence | MLFYRPLASI QALTFDLDDT LYDNRPVIKQ VEEKVTEWLL SEHPITATRP LAWWLAMKRD
IARRFPEQCH DVSQWRYLQV QHGLLELGYA QPEAEQAASE TLEQVMRWRN QVDVPAETHR
VLAQLAAKVP LIAITNGNVQ IEKIGLSGYF QTVLRAGPDG RAKPYPDLFA QAAQQLQLEP
RSILHVGDHL QTDVLGARQN GFQACWFNDQ GQSIRRLAKA SVLPDVEIER LSELLLIVN
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