| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_69720 |
|---|
| Symbol | |
|---|
| ID | 4385065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 6218435 |
|---|
| End bp | 6219133 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639328221 |
|---|
| Product | putative hydrolase |
|---|
| Protein accession | YP_793755 |
|---|
| Protein GI | 116053430 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.673064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.5613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC TGCGACTGAT CACCTTCGAC CTCGACGACA CCCTGTGGGA CGTCGCCCCG
GTGATGAACA ACGCCGAGGC CCTGCTCCGC GAATGGCTGG CGAGCAACGC GGCGCGCCTG
GGTCCGGTGC CCATCGAGCA CCTGTGGGCG ATCCGCACCC GCCTGCTGGA TCGCGAACCG
ATGCTGCGCC ACCGTCTCAG CGAGCTGCGC CGGCGCATCC TGTTCCATGC CCTGCTCGAC
GCCGGTTATC CACAGGCGGA GGCGGAAAGC CTGGCCGAGG CCGGTTTCCA GGTATTCCTC
GAAGCGCGCC ACCGGGTCAC CCTGTTTCCC GAAGTCCACC CGACCCTGGA GATCCTCGCC
GACCGCTTCA CCCTCGGCGT GCTCACCAAC GGTAACGCCG ACGTGCGCCG CCTGGGCCTG
GCCGACTACT TCCGGTTCGC CCTCTGCGCC GAGGAACTGG GCGTCGGCAA GCCCGACCCG
ACGCCATTCC GCGAAGCCCT GAAGCGCGCC GGCGTCGAGG CCTCGGCAGC GGTACACATC
GGCGACCACC CCAACGACGA CATCGCCGGA GCGCGCCGCG CCGGCATGCG TGCCATCTGG
TTCAACCCAA ACGGCAAGCC CTGGGCCGGG GAGGAAGAGC CGAGCGCGGA GATCCGCAGC
CTCGCCGAGC TGCCGGCCCT GCTCGCCCGC CTGCAATGA
|
|---|
| Protein sequence | MSSLRLITFD LDDTLWDVAP VMNNAEALLR EWLASNAARL GPVPIEHLWA IRTRLLDREP
MLRHRLSELR RRILFHALLD AGYPQAEAES LAEAGFQVFL EARHRVTLFP EVHPTLEILA
DRFTLGVLTN GNADVRRLGL ADYFRFALCA EELGVGKPDP TPFREALKRA GVEASAAVHI
GDHPNDDIAG ARRAGMRAIW FNPNGKPWAG EEEPSAEIRS LAELPALLAR LQ
|
|---|
| |