| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1653 |
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| Symbol | |
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| ID | 4670830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1712337 |
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| End bp | 1713029 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838742 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_985920 |
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| Protein GI | 121594024 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.144199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.146413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATA TTTCCCGCAT CCGCGCCATC ACTCTTGACC TGGATGACAC CCTATGGCCT
ATCTGGCCCA CCATTGCACG GGCTGAGGAG GTGCTGATCG AGTGGCTGCT CACGGTGGCG
CCCGGCGCCT CGGCGCTGCT GGCGTCGCCC GACACGTCCC GCATGCTCCG TGCGCAGGTG
GCGTCCGCCC ATGCGCACCT GTCGCACGAC CTGACGGTGC TGCGCCGCGA GACCATCCGC
GCAGCGCTGC GCCAGGCGGG CGAGGACGAG TCGCTCACGG ACCAGGGGTT CGACGTGTTC
TTCGCCGAGC GCCAGCGGGT GGAGCTGTTC GACGATGCGA TAGCGGCGCT GGAATTCCTC
TCGGCGCGCC ACCCGGTGGT GGCGCTGTCC AATGGCAATG CGGACCTGCA GGCCATCGGC
ATCGGACAGT ACTTTCGCGC CAGCATCAGC GCCCGCGAGT TCGGTATTGC CAAGCCCGAC
CCCCGCATCT TCCATGAGGC GGCGCGGGTG CTGGACCTGC CGCCCGGGGC CGTGCTGCAC
ATAGGCGACG ACGCCACGCT GGATGCGCAT GGCGCGCTGG GCGCCGGCAT GCAGGCGGCC
TGGCTCAATC GGGGCGATGC GGCGTGGCCG CACGCGGTGG CGCCCCCTGC CACCGTGCGC
GACCTGGCCG CGCTGTGCCG TCTGCTGGGG TAG
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| Protein sequence | MLDISRIRAI TLDLDDTLWP IWPTIARAEE VLIEWLLTVA PGASALLASP DTSRMLRAQV
ASAHAHLSHD LTVLRRETIR AALRQAGEDE SLTDQGFDVF FAERQRVELF DDAIAALEFL
SARHPVVALS NGNADLQAIG IGQYFRASIS AREFGIAKPD PRIFHEAARV LDLPPGAVLH
IGDDATLDAH GALGAGMQAA WLNRGDAAWP HAVAPPATVR DLAALCRLLG
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