| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5292 |
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| Symbol | |
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| ID | 5873107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5910950 |
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| End bp | 5911645 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550428 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001671509 |
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| Protein GI | 167036278 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA AGCTGATCAC CTTCGACCTG GACGATACCC TGTGGGACAC CGCGCCAGTG
ATTGCCACTG CCGAAGTCGT GCTGCGCGAC TGGCTCGAAG CCAACGCCCC GATCCTTGGC
GGCGTGCCGG TGGAGCACCT GTTCGCCATC CGCGAGCGCC TGGTACAAGC CGAGCCCGGC
CTCAAGCACC GCATCAGCGC CCTGCGCCGG CGCGTGCTGT TCCATGCCTT GGAAGAGGTC
GGCTACAGCG AGAAACATGC GCAGGAACTG GCCAACGAAG GTTTCGAAGT ATTCCTGCAT
GCCCGCCATC AGGTGGAGAT CTTCCCCGAA GTGCAACCGG TGCTGGAGAT TCTGCGCCAC
CACTACACCC TGGGCGTGGT CACCAACGGC AACGCCGATG TGAGCCGGCT GGGGCTGGCG
GACTACTTCC GCTTTGCCCT GTGCGCTGAG GACCTCGGTA TCGGCAAGCC GGACCCGGCG
CCGTTTCTGG AAGCCCTACG CCGTGGAGAA TCGGAAGCCA GCGCGGCGGT GCACATTGGC
GATCACCCCG GCGATGACAT CGCTGGCGCC CAGCGCGCCG GTCTGCGTGC GGTATGGTTC
AACCCACAGG GTAAGGCATG GGCGGGCGAA CAGGCACCGG ATGCCGAGAT CCAGCGCCTG
TCGCAGCTGC CCGACATCCT TTCGCGCTGG CGTTGA
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| Protein sequence | MSIKLITFDL DDTLWDTAPV IATAEVVLRD WLEANAPILG GVPVEHLFAI RERLVQAEPG
LKHRISALRR RVLFHALEEV GYSEKHAQEL ANEGFEVFLH ARHQVEIFPE VQPVLEILRH
HYTLGVVTNG NADVSRLGLA DYFRFALCAE DLGIGKPDPA PFLEALRRGE SEASAAVHIG
DHPGDDIAGA QRAGLRAVWF NPQGKAWAGE QAPDAEIQRL SQLPDILSRW R
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