| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_41148 |
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| Symbol | |
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| ID | 4837359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 104481 |
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| End bp | 105434 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388674 |
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| Product | predicted protein |
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| Protein accession | XP_001382782 |
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| Protein GI | 150864086 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR02252] REG-2-like, HAD superfamily (subfamily IA) hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.107357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACGG AAGTTCCGCG TGGCCAGTTT CTTTCGAATC CCTTTGAAAT AGACAATATA
CAAGTTATAA GAGAAACCAA AGACCATTTT CCTAAACCGT CGTTGATCTC ATTTGACGTA
TTTGGCACCC TTTATGAACC TAGCCCTGCT ATTTCACATC AGTATCACAA AATCGCTTCT
GAAGAGTTTG GAATCATCAA GCCTGTAGCA GAAATCGAAA AAGAGTTTCC TGTTTTGTTC
AAAGAATTGG AGGAGTTGTA TCCCAACTAC GGTAGATTCA ATGATGAAAT CCAGGGTTCA
GACCATTGGT GGCTGGAACT TATTGTGAGA CTATACAATA TTGAAAGCTA CAAGACCAAC
AAGCATTCAG CGGCATTATG TAACCGTCTC TTGAACCACT TTACTGGACC TCTGGCTTAC
AAGTTGTATG ACGATGTAAT TCCTACACTC ACCAAGTTGA AGAATAACGG TATCAATATG
GTAATCTCAA CTAATTCTGA TGGAAGAGTA CGGGATATTA TCCATAATCT AGGTCTAGCA
CAATTCTTCC CCAACGACAA CTTTTACCTT TCCTACGATA TTGGAGCTGT TAAGCCTTCC
AGACAGTTCT TTGACAGTGT GTCTCTGCAA TTCTACATGA ACAATTATCA TAAAAGGCTT
CTTCGCAAAA ATCAGGGTGC TTTCTTAGAG AATTGCTGGC ATGTGGGCGA CAGCCATCTG
AAGGATTTCC TTGGTGCCAT AAGATCAGGC TGGAATGGTG TGCTTGTAGA TCGAGATCAG
ACTAGCGAAT TTTTTAGTAC CAGAACGAAG AAACCAGAGA AGGAAGAGTA TGCTGGTTGT
GGGCTTTCGG GGATGCCTGG CAAAAACAAG CCGACTGATA TGTTGATGCT AGCAAATAAC
AGAGTGGTAC TTACACGTTT GGAACAGTTG TTGGAGATGT TCAACATTGA GTAG
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| Protein sequence | MSTEVPRGQF LSNPFEIDNI QVIRETKDHF PKPSLISFDV FGTLYEPSPA ISHQYHKIAS
EEFGIIKPVA EIEKEFPVLF KELEELYPNY GRFNDEIQGS DHWWSELIVR LYNIESYKTN
KHSAALCNRL LNHFTGPSAY KLYDDVIPTL TKLKNNGINM VISTNSDGRV RDIIHNLGLA
QFFPNDNFYL SYDIGAVKPS RQFFDSVSSQ FYMNNYHKRL LRKNQGAFLE NCWHVGDSHS
KDFLGAIRSG WNGVLVDRDQ TSEFFSTRTK KPEKEEYAGC GLSGMPGKNK PTDMLMLANN
RVVLTRLEQL LEMFNIE
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