| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2563 |
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| Symbol | |
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| ID | 5748132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2837460 |
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| End bp | 2838230 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297651 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001563586 |
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| Protein GI | 160898004 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.764506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.125502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG CCACCATCGC CCCCCTCGCC GAATCCTCTC TTGCCCCTGC ATTGGCCGCA
TTGCAGCAGC TGCGCCGCAG CGGCCGCATC CGCGCCATTT CCATCGACCT GGACGACACG
CTGTGGCCCG TGTGGCCAGC CATCTCGCGC GCCGAACAGG TGCTGCTGGA ATGGCTGCAC
GCCCATGCGC CCACCACGGC CGCAGCGCTG CGCGACGTGG CCACCCTGCG CGCCATCCGC
GTGCAGATCG AGCGTGACCG CCCGGACCTT GCCCACGACC TGAGCGGCCT GCGCCGCGAG
TCCATCCGCC TGGCGCTGCA GCGCAATGGC GACGACGGCG CGCTGGCCGA GCCGGCCTTC
GATCTTTTCT TTGCCGAGCG CCAGCGTGTG GACCTGTACG AGGACGCGCT GCCCGCCCTG
CAGTTCCTGG CCGCGCGCTG GCCCGTGGTG GCGCTGAGCA ACGGCAACGC CAGCGTGCAC
GTGGTGGGCA TTGGCGAGCA TTTCCATGCC GCGCTGAGCG CGACCAAGGC CGGCATGGCC
AAGCCCGATG TGCGCTTTTT TCACGCGGCG GCGGCGGCGG CAGGCGTGGC GCCTGACGAG
GTGCTGCACA TTGGCGACGA CGCGCGGCTC GATGCGCTGG GCGCCATGGA TGCGGGTATG
CACGCAGTCT GGCTCAACCG CACGGGCGTA GCATGGCCTC ACGAGGGGTC CACGCCCCAC
GTCACGGTGG CCAGCCTTGC GCAGTTGTGC CAGGGGCTGG CTGACAGCTG A
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| Protein sequence | MSQATIAPLA ESSLAPALAA LQQLRRSGRI RAISIDLDDT LWPVWPAISR AEQVLLEWLH
AHAPTTAAAL RDVATLRAIR VQIERDRPDL AHDLSGLRRE SIRLALQRNG DDGALAEPAF
DLFFAERQRV DLYEDALPAL QFLAARWPVV ALSNGNASVH VVGIGEHFHA ALSATKAGMA
KPDVRFFHAA AAAAGVAPDE VLHIGDDARL DALGAMDAGM HAVWLNRTGV AWPHEGSTPH
VTVASLAQLC QGLADS
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