| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1566 |
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| Symbol | |
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| ID | 7859722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1798312 |
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| End bp | 1799103 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643865651 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_002881584 |
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| Protein GI | 229820058 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCGC CCGACGGCGT GACCGGCGTC CTGTTCGACA TCGACGACAC GCTCGTCGAC
ACGCGGACCG CGTTCGCCGT CGCGCTGGAC GCCGTCGTCG ACGCCTACCT GCCCGGACTG
GGCGCCCCCG AACGGGCCGA GGTCCTCGCG ATGTGGCGTG CCGACACCGG CCGCTACTAC
AAGGCCTACA TTCGTGGCGA GCTCACGCAG ACGGCGCAGC GCCACGCCCG TGCCCAGCAG
ATCCTCGACG CGTTCGGTGG TCCGACGCTC GACGACGCCG GGCTCGCCGC GTGGGACCAG
GTGTATCTCG CGGCGTTCGC CGACGGATGG GTGGCCCACC CGGAGGCGGT GGAGGTCGTC
GGCCAGCTCC GGGAGGCCGG GATCGCCGTC GGCGCCCTGA CGAACGCCAC CCGCGAGATG
CAGGTGCTCA AGCTCGAGCG CACGGGGTTC TCCGACCTCC CGCTGCTCCT CACGGTGGAC
GACCTCGGCG TCGGCAAGCC CGACCCGCGC GTGTTCCTCG AGGCGGTGCG GCTTCTCGGC
ACGAGCCCGG GGGAGACGGT CTACGTCGGG GACGAGCTCG ACACCGACGC GTTCGGCGCC
CGCGACGCCG GGCTGCGCGG GGTGTGGCTC GACCGCCCAG GAAACCGTCG GGGCGGGCCG
CACATCGAGG ATCCCGAGCT CGCCGCCGCC GAGGGCATCC CGGTTCTCGC CTCGCTGGAC
GAGCTTCCCA GCCTCTTGGG CGTCGCGCCC CGAGCAGACG CCGTGACGCG CGTCAGCCCG
CCGACGCGCT GA
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| Protein sequence | MTAPDGVTGV LFDIDDTLVD TRTAFAVALD AVVDAYLPGL GAPERAEVLA MWRADTGRYY
KAYIRGELTQ TAQRHARAQQ ILDAFGGPTL DDAGLAAWDQ VYLAAFADGW VAHPEAVEVV
GQLREAGIAV GALTNATREM QVLKLERTGF SDLPLLLTVD DLGVGKPDPR VFLEAVRLLG
TSPGETVYVG DELDTDAFGA RDAGLRGVWL DRPGNRRGGP HIEDPELAAA EGIPVLASLD
ELPSLLGVAP RADAVTRVSP PTR
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