| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1882 |
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| Symbol | |
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| ID | 6877867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1866794 |
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| End bp | 1867540 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642789752 |
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| Product | Haloacid dehalogenase domain protein hydrolase |
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| Protein accession | YP_002220310 |
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| Protein GI | 198283989 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0746136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.527503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCATAC GCGCCGTATT TTTCGATCTT TATGGTACCC TGATCAACAT CGAAACCAAT
GAGGAAATGG AGGAGATTTA TCGCGGCATA TCCCATTATC TCACCTATCA CCGAGTCTTC
ATGAACCGGC GTGAGGTCCG CGAACGCTAC TTTGCCATCC TGAAAGAAGG GAAACGCCAA
TCTCCGGAAA GATATCCGGA AATCGACGTG GAGGCGATCT GGCACACGTT GCTCGTCCAG
GAGAACAGCA AACCCCTCAA AGGCCGGGGG AAACTGGCCA GAGAGTTGGC CCGCCTGCAT
CGTGGTCTCT CCCGCACCCG TCTGGAGCGT TACGACGGTG TCAAACGTAT CCTGAAAAGT
GTTCAGGAAA GCTACCGGAT GGCGACGGTT TCCGACGCGC AACGCTGCTT TGCGCTCCCC
GAAATGCGCG CGTTGGGTAT CAAGAAATAT TTTGACGTAC GGGTTATTTC CGGTGACTAC
GGCTATCGCA AGCCAGACCC TCGATTATTC ACCACGGCCG CAGAGCAACT GGAAGTGGCT
CCCCATGAAA CTATCTATGT CGGCAATGAT ATGTATCGGG ATATTTATGG CGCCCAACAG
GCGGGGATGA AAACCATTTT TGTGGACTCC AATCAAGGCA GCAAATCCTA TAACGACGTA
GCGCCAGATT ATTATGCGAG AGATCTATAT CAAGTGCTGG ATGGCATCGG GTTTCTCGCA
CTGAAACATG CGGATGGCGA TGACTGA
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| Protein sequence | MSIRAVFFDL YGTLINIETN EEMEEIYRGI SHYLTYHRVF MNRREVRERY FAILKEGKRQ
SPERYPEIDV EAIWHTLLVQ ENSKPLKGRG KLARELARLH RGLSRTRLER YDGVKRILKS
VQESYRMATV SDAQRCFALP EMRALGIKKY FDVRVISGDY GYRKPDPRLF TTAAEQLEVA
PHETIYVGND MYRDIYGAQQ AGMKTIFVDS NQGSKSYNDV APDYYARDLY QVLDGIGFLA
LKHADGDD
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